LOC_Os10g25310

Expression Profile

RGAP LOCUS ID LOC_Os10g25310
RAP-DB ID Os10g0392600
Function SPX domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Nuclear
score 1.295

3) NUCPRED Prediction
localization Non Nuclear
score 0.25

4) Y-Loc Prediction
localization Nuclear
score 98.45
confidence value 0.69
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSPX3
Function assigned as per literature OsSPX3 is involved in plant tolerance to Pi-starvation stress
Subcellular localization as per literature Cytoplasm
Cells used for localization experiment onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 19566645
Reference of localization https://onlinelibrary.wiley.com/doi/epdf/10.1111/j.1744-7909.2009.00834.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.159
NLS score -0.47
Protein Sequence >LOC_Os10g25310.1 protein
MKFGKRLKKQVEESLPEWRDKFLAYKRLKKLVRLVSSSSGDVGGGGGGEAEFVRLLDGEVDRINAFFLEQEEEFVIRQRELQETVEKVAGGGGGGRRPAA
AEMRRVRKEIVDLHGEMVLLLNYSAVNYTGLAKILKKYDKRTGRLLRLPFIEKVLRQPFFTTELISRLVRDCEATMEAIFTSSVATTAMAGDRRTWKGCS
GDAGMAPMADQQGIFRNTVAALATMKELRSGSSTYGRFSLPPMAAPASPESDVLQSIRSDPHLKENGRIPSLQFFYA

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term response to extracellular stimulus
4
GO Category Biological Process
GO Term cell communication
5
GO Category Biological Process
GO Term response to stress
Presence of Splice variants No