LOC_Os10g25290

Expression Profile

RGAP LOCUS ID LOC_Os10g25290
RAP-DB ID Os10g0392400
Function ZIM domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Nuclear
score 1.319

3) NUCPRED Prediction
localization Non Nuclear
score 0.34

4) Y-Loc Prediction
localization Cytoplasm
score 46
confidence value 0.07
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category Tify

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsJAZ12|OsTIFY11d
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.111
NLS score -0.1
Protein Sequence >LOC_Os10g25290.1 protein
MAAAGSSSRFAVTCGLLSQYMRERQQPQPPVTVLEAVAEEEEEEDARTMQLFPPRAAAADGVATPSAGTAPLTIFYDGRMVVVDDVPVEKAAELMRLAGS
ACSPPQPAHAAALPEMPIARKASLQRFLQKRKHRITTTSEPYKKAAVASPAPEKSFAVAPVKDEPATWLGL

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Molecular Function
GO Term protein binding
3
GO Category Biological Process
GO Term response to endogenous stimulus
Presence of Splice variants No