LOC_Os10g23220

Expression Profile

RGAP LOCUS ID LOC_Os10g23220
RAP-DB ID Os10g0378400
Function GIL1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 9

2) CELLO Prediction
localization Nuclear
score 3.115

3) NUCPRED Prediction
localization Non Nuclear
score 0.44

4) Y-Loc Prediction
localization Nuclear
score 84.24
confidence value 0.93
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) GIL1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.121
NLS score -0.47
Protein Sequence >LOC_Os10g23220.1 protein
MVLPGSKESQNYDSNNQKVHPQPIDENMNQNMGSMDTMIGRIFNNISSLKSAYIQLQEAHTPYDPDKIQAADQLVIEELTKLSELKHAYREKNPKPVAAT
PQDARLLSEIQEQQNLLKTYEVMVKKFQSQIQTRDTEITHLQQQIDEAKLRKSKLEKKLKQRGLLNKESEESDDEDNYFSIELTPSLFTSAVDNAYQSIH
DFSKPLINMMKAAGWDLDAAANAIEPAVVYTRRAHKKYAFESYICQRMFGGFQEESFSVKAANITVSNEAFFHQFLAVRAMDPLDVLSQNPDSVFGKFCR
SKYLLLVHPKMEGSFFGNMDQRNYVMSGGHPRTPFYQAFLKLAKSIWLLHRLAYSFDPKVKVFQVKKGSDFSEIHMESVVKNIILDEGAERPKVGLMVMP
GFLIGTSVIQSRVYLSGVKSAD

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Cellular comBiological Processonent
GO Term vacuole
4
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES