LOC_Os10g21810

Expression Profile

RGAP LOCUS ID LOC_Os10g21810
RAP-DB ID Os10g0362300
Function histidine kinase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 11

2) CELLO Prediction
localization PlasmaMembrane
score 2.291

3) NUCPRED Prediction
localization Non Nuclear
score 0.41

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.18
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category Orphans

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OHK3|OsHk5
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.11
NLS score -0.47
Protein Sequence >LOC_Os10g21810.1 protein
MSRVGECGGGGGCGARRGKAAHAGAGAVAGFLGCLLLVWAMGGCGRGCGGGGGEGVRDRVEEVAAQFNLSMSKLQALASLLSSPERECICKSGTINDDNP
AHSMPDMSNCRLKNKPSGGNQNRLDNVIIQDCCANEDNYDKNNHENNLLQNAMQQDIGSPTTLWNLCLCDLCIVINGLNVQQNNALSFNHGMIFSLSASL
GIVVILVVITIFKRGKQANELCQHEKLLQTPSVKISRKWSKRALLLGVLVGLCSSVWIFSSMHADVVARRIENLENMCDERARMLQDQFNVSMNHVHALA
ILVSTFHHGKNPSAIDQKTFEDFTARTTFERPLMSGVAYALKVLHSERELFEQKLGWKIKKMETEDQSLVHDYNPEKLQPSPVQDEYAPVIFSQETVKHI
ISVDMMSGKEDRDNILRSRATGKGALTAPFPLLKSNHLGVVLTFTVYKYDLPPDATPEERIEATLGYLGASFDVPSLVERLLEQLASKQKIVVRLYDITN
HTYPTKMYDSDVIASDDLHISNIDFGDPTRKHVMHCRFKHAPSLPWSAIMISSAVAIIVLLVGYIIYATLNSLEEAEDNYTTMRDLKGRAEAADVAKSQF
LATVSHEIRTPMNGVLGMLQMLMDTELDTTQRDFVVTAQESGKSLINLINEVLDLAKIESGKIELEAVRFDVRDILDNVVSLFSEKSWAKGIELAVLVSD
QVPDVLIGDPWRFRQIITNLVGNSMKFTEQGHIFIRVHLIEEVKRKMEALDDTSPENIEVTANSKNTMPYNTLSGLEVANNRKTLESFRMFKDSSDAIDS
VNLLVTVEDTGIGITKDAQTRIFTPFMQADGSTSRTYGGTGIGLSITKRLVELMGGEIGFVSKPGVSSTFSFTAIFKENRKDPGDIKRYCPEPTPPDFQG
MRALVVDGRCARAEVTMYHLRRLGIQCDLAATSESALSALLESCNSSVKSSLNMVLVDKEAWGEDSGLAFFRCLIDLRLKGTLKSWQTMPKFFLLAGSIT
PADSDCLRLAGYSNSIRKPLRLSTVAACLSKALGVGLTGRRSRDNSLVLRSVLTGKNILVVDDNAVNRIVAAGALKKYGAIVTCVDSGKEAISRLQPPHK
FDACFMDVQMPEMDGFEATRLVRSVESKINDTIQAASAKNPFGDNNIAKQKSYAVNREQKFDWTAIYVSFDNWMKSISTSRLQPCA

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term response to stress
3
GO Category Biological Process
GO Term response to abiotic stimulus
4
GO Category Molecular Function
GO Term receptor activity
5
GO Category Molecular Function
GO Term signal transducer activity
6
GO Category Biological Process
GO Term flower development
7
GO Category Biological Process
GO Term cellular process
8
GO Category Biological Process
GO Term biological_process
9
GO Category Molecular Function
GO Term kinase activity
10
GO Category Biological Process
GO Term transport
11
GO Category Biological Process
GO Term catabolic process
12
GO Category Biological Process
GO Term signal transduction
13
GO Category Biological Process
GO Term response to endogenous stimulus
14
GO Category Molecular Function
GO Term protein binding
15
GO Category Biological Process
GO Term growth
16
GO Category Biological Process
GO Term multicellular organismal development
17
GO Category Biological Process
GO Term protein modification process
18
GO Category Biological Process
GO Term post-embryonic development
Presence of Splice variants YES