LOC_Os10g13940

Expression Profile

RGAP LOCUS ID LOC_Os10g13940
RAP-DB ID Os10g0206800
Function MATE efflux protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 8

2) CELLO Prediction
localization PlasmaMembrane
score 4.831

3) NUCPRED Prediction
localization Non Nuclear
score 0.05

4) Y-Loc Prediction
localization Cytoplasm
score 75
confidence value 0.51
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsFRDL2
Function assigned as per literature OsFRDL2 is involved in the Al-induced secretion of citrate, its contribution to high Al tolerance is relatively small in rice.
Subcellular localization as per literature unidentified vesicles
Cells used for localization experiment onion epidermal cells.
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 26872836
Reference of localization https://academic.oup.com/pcp/article/57/5/976/2223228
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.069
NLS score -0.29
Protein Sequence >LOC_Os10g13940.1 protein
MNGESLLDRSSSADAAMNDAVPGHRHHHPLSVFLRDARLAFRWDELGREIMGIAVPGALALMADPVASLVDTAFIGHIGPVELAAVGVSIAVFNQVSRIA
IFPLVSVTTSFVAEEDATSSDREKYEINGENEFNVSDSEMEELVSHEEASAAPSKSSFETDSSDVKIEHKRKNIPSVSTALLLGGVLGLLQALLLVICAK
PLLGYMGVKQGSAMLMPALKYLVVRSLGAPAVLLSLAMQGVFRGLKDTKTPLYATVAGDATNIVLDPIFMFVFQYGVSGAAIAHVISQYFIASILLWRLR
LHVDLLPPSFKHMQFSRFLKNGFLLLARVIAATCCVTLSASMAARLGSVPMAAFQICLQIWLASSLLADGLAFAGQAILASAFARQDHSKAAATASRILQ
LGLVLGLLLSIFLGIGLRLGSRLFTDDQDVLHHIYLGIPFVSLTQPINALAFVFDGINYGASDFGYAAYSMILVAIVSIIFIVTLASYNGFVGIWIALTV
YMSLRMLAGFLRIGTARGPWTFYAAQRMHSHEVVGLC

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Biological Process
GO Term transport
4
GO Category Biological Process
GO Term cellular process
5
GO Category Molecular Function
GO Term transporter activity
Presence of Splice variants No