LOC_Os10g13700

Expression Profile

RGAP LOCUS ID LOC_Os10g13700
RAP-DB ID Os10g0204400
Function phosphoenolpyruvate carboxykinase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 10

2) CELLO Prediction
localization Cytoplasmic
score 1.896

3) NUCPRED Prediction
localization Non Nuclear
score 0.18

4) Y-Loc Prediction
localization Cytoplasm
score 99
confidence value 0.99
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) PEPCK
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.107
NLS score 0.39
Protein Sequence >LOC_Os10g13700.2 protein
MMEAKDGQAWLGTNGYGSRREEDGVCHDDSATPVRANTVDELHSLQRKPQVVEDRHRLQLQSISASLASMTCGIGPKLVNGDPARKKEMAGKAVTHHQHH
ITVPTITVSDSDLKFTHVLYNLSPSELYEHAIKYEKGSFITSSGALATLSGAKTGRSPRDKRVVKDETTDDLWWGKGSPNIEMDEQTFLINRERAVDYLN
SLDKVFVNDQFLNWDPNNRIKVRIISARAYHSLFMHNMCIRPTYEELENFGEPDFTIYNAGQFPCNRYTHYMTSSTSIDLNLKRREMVILGTQYAGEMKK
GLFSVMHYLMPKKQILSLHSGCNMGRGGDVALFFGLSGTGKTTLSTDRNRILIGDDEHCWSDNGISNIEGGCYAKCIDLSQEKEPDIWDAIKFGTVLENV
VFDEHSREVDYTEKSVTENTRAAYPIEYIANAKIPCVGPHPKNVILLACDAFGVLPPVSKLSHAQTMYHFISGYTALVAGTEDGIKEPQATFSACFGAAF
IMLHPTRYAAMLADKMNKHGATGWLVNTGWIGGR

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term response to stress
3
GO Category Biological Process
GO Term response to biotic stimulus
4
GO Category Biological Process
GO Term response to extracellular stimulus
5
GO Category Biological Process
GO Term cell communication
6
GO Category Cellular comBiological Processonent
GO Term nucleus
7
GO Category Biological Process
GO Term metabolic process
8
GO Category Molecular Function
GO Term nucleotide binding
9
GO Category Biological Process
GO Term biosynthetic process
10
GO Category Biological Process
GO Term carbohydrate metabolic process
11
GO Category Biological Process
GO Term cellular process
12
GO Category Biological Process
GO Term biological_process
13
GO Category Cellular comBiological Processonent
GO Term nucleolus
14
GO Category Molecular Function
GO Term protein binding
15
GO Category Cellular comBiological Processonent
GO Term cytosol
16
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants No