LOC_Os10g07210

Expression Profile

RGAP LOCUS ID LOC_Os10g07210
RAP-DB ID Os10g0159700
Function hsp20/alpha crystallin family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 13

2) CELLO Prediction
localization Chloroplast
score 3.759

3) NUCPRED Prediction
localization Non Nuclear
score 0.33

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.82
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCIA
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.132
NLS score 0.65
Protein Sequence >LOC_Os10g07210.1 protein
MSTVTSCTFLSIRPTVSSAGSLLSKKPAAFVSLASERKSRPLSPCFAISSNKPGDPKIDVSPFSISPVVLVNPVPVDGERWQVAENKDEVSLWFDVPGLS
PADLIVEIDEDVLVIKKKKKASPKSNYNTPTSGAIADHQEATADEFSGGGIYARLLLPAGYSREGVQAKLTSGELKLTIGKVKESVRRKINVDISVK

GO Analysis
1
GO Category Biological Process
GO Term response to abiotic stimulus
2
GO Category Biological Process
GO Term response to stress
3
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No