LOC_Os10g03660

Expression Profile

RGAP LOCUS ID LOC_Os10g03660
RAP-DB ID Os10g0125300
Function OsFBX345 - F-box domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 11.5

2) CELLO Prediction
localization Nuclear
score 2.621

3) NUCPRED Prediction
localization Non Nuclear
score 0.44

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.17
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsADF
Function assigned as per literature ADF controls rice anther development
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Onion epidermal cell
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 25236969
Reference of localization https://link.springer.com/article/10.1007%2Fs00425-014-2160-9
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.112
NLS score -0.47
Protein Sequence >LOC_Os10g03660.1 protein
MMLQSDFAFLLSAPSTPTTCSTKRCCASWATTATADGLIMEPQQVPINDRLSNLSNDLICRIISNLDSRQAVQTSLLSRRWRNLWCSLTSIKVDFCEFDG
ETDSWEGDQARFRKFVNNLLLRRDPVPVLDKFCLRSYIPHGANDQEASADANLWISHALQLKAPVVEVDQDIQTRDTLELGGHAVFASQYLTRLVLSAVS
FTQGFFKQLEIGCSKLEHLSIYDSIICVDISSKTLKVLIIDNSEFSYDYNTSISTPSATSLTLIDLGGRLPLLKDMGSLVSASVYLTREAIPLDTAINID
QWFMGLSGVRHLALDFPVEVIKIKDNMQWCPKFNNLVNLTLGRWCLDSKLYALTVFLQNSPKLEKLRLEIDEGYTAKDIKGELKERSFTCEHLKIVEVDC
VEDDPLEVECLEDEPDPLVNRVKKFFRNSGMTSIQINITHLDYHLPYEYNIEDNMQWCSKLNNLVNLTLGRWCLDSKLYALTVFLQNSPKLEKLRLEIDE
GYTAEKITCELQERSFTCEHLKIVEVACVEDDPLEVTCLEDDDDDDPLVDRVEKFFRDSGMTSLEYPAAFYDSWRVLSEFQDLLSLLIAFDFGEEATRLQ
CEMVVKKEEATLLQCEMVVQRYGMDMYKGKRPPFYNAKWLSKCSLHHPRPPPVRRNASAPLGSPGWLMEPEKAPGRGRLMLSDLPDDLIRRIMSFLYARQ
AVRTCVLSRRWRDLWRSLTRINADFCEFKGDTRTWVGDKARFEKFLNALLLRRDPVLLVDKFWLRCPSCSFGVYSLDANLWISHVLQLQAPVLDVRAVGI
SRLNQAVFTSQYLRRLALSSVVLSKGFFNQLKMRCPELECLFLRDCHIHDHHISSQTLKILTINISDFSFVDKYDCCISTPSVTALTLFGPKGRVPLLQD
MASLVSASVYLANDFSNFGTAGDVHRLLTSLSGVKYLALDFDGVNEVQITNENNIQWCPEFIDLVSLTLGSWCLESNFYGLTVFLQNSPKLEKLTLKLNK
VHTRRIVGKLKEKSFTCERLKVVEVICIGDDPLVNCVEEFFFNSGMTSLQIRINHLDGYELYEPRLYRDEYRRRQYMG

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No