LOC_Os10g01134

Expression Profile

RGAP LOCUS ID LOC_Os10g01134
RAP-DB ID Os10g0101200
Function OsSCP46 - Putative Serine Carboxypeptidase homologue, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 12

2) CELLO Prediction
localization Extracellular
score 1.632

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.69
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSCP46
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.074
NLS score -0.47
Protein Sequence >LOC_Os10g01134.1 protein
MHLLASSSSIPMATTRATSTLLLLLLLVSATWAASAPTTSRARNVITHVKGFQGRLPFHLETGYVEVDNTNTVELFYYFIQSERSPADDPLILWITGGPG
CSALSGLLFEIGPLKFDVAGYTEGFPQLFYFQDSWTKVSNVIFLDAPVGTGFSYAREEQGYNVTLTQTGQQLVVFLTKWLGDHPEFASNPLYIGGDSYSG
YTVPVTALQIANDDDARARLNLKGYLVGNAATDVKYDSGGKVPFMHGMGLISDEMYEAARSSCRGDYVSTPTNADCANALQAISMATFAINPVHILEPIC
GFALRGRAMPETTMDQRLRLGLPVECRDNGYRLSYLWADDPEVRATLGIHEGSIASWSRCTALPLFRHDVDSAIPYHAELTQRGYRALVYNGDHDLDMTF
VGTQQWIRTLGYNVVTAWRPWYSNRQVAGFTTVYDHNLTFATVKGGGHTAPEYRPKECLDMLDRWTSPAGEL

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Biological Process
GO Term protein metabolic process
3
GO Category Molecular Function
GO Term hydrolase activity
Presence of Splice variants YES