LOC_Os09g37540

Expression Profile

RGAP LOCUS ID LOC_Os09g37540
RAP-DB ID Os09g0547500
Function uncharacterized protein PA4923, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 7

2) CELLO Prediction
localization Chloroplast
score 2.529

3) NUCPRED Prediction
localization Non Nuclear
score 0.09

4) Y-Loc Prediction
localization Cytoplasm
score 64
confidence value 0.26
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsLDC-like1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.101
NLS score 0.02
Protein Sequence >LOC_Os09g37540.1 protein
MYISSPHTSHFTSIDRSPAVVSESDRSMEEAAAAADMNGGVHQSRFRRVCVFCGSSSGKRRSYRDAAVELGKELVARKVDLVYGGGSLGLMGEVAEAVRN
GGGHVIGVIPTTLMGKEVTGETVGEVREVGSMHERKAEMARRSDAFVALPGGYGTLEEVVEVIAWAQLGIHAKPVGLLNVDGYYDFLLAFVDKAVADGFI
PPSHRHLFVSAPDAPSLVHKLEEYVPV

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term nucleus
3
GO Category Cellular comBiological Processonent
GO Term cytosol
4
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No