LOC_Os09g36300

Expression Profile

RGAP LOCUS ID LOC_Os09g36300
RAP-DB ID Os09g0533400
Function OsLonP4 - Putative Lon protease homologue, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 6

2) CELLO Prediction
localization Mitochondrial
score 3.627

3) NUCPRED Prediction
localization Non Nuclear
score 0.27

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.28
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsLon1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.132
NLS score -0.47
Protein Sequence >LOC_Os09g36300.1 protein
MADAAVELPGRLAILPFRNKVLLPGAIVRIRCTNPSSVKLVEQELWQREEKGLIGVLPVHDSEAAGSLLSPGVGSDSGEGGSKAPGGSAGESTKQDTKNG
KETIHWHSRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFSVQELSARGSYHVARVSRLDMTKTELEHAEQDPDLIALSRQFKATAMELISVLEQKQKT
VGRTKVLLETVPVYRLADIFVASFEIGFEEQLSMLDSVDLKVRLSKATELVDRHLQSILVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDED
DVAALERKMQNAGMPANIWKHAQRELRRLRKMQPQQPGYSSSRTYLELLAELPWQKVSEERELDLRAAKESLDRDHYGLTKVKQRIIEYLAVRKLKPDAR
GPVLCFVGPPGVGKTSLASSIAKALNRKFIRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKRVSVSNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQ
NKTFNDHYLNVPFDLSKVIFVATANRMQPIPPPLLDRMEVIELPGYTPEEKLKIAMKHLIPRVLEQHGLSSTYLQIPEAMVRLIIERYTREAGVRNLERN
LAALARAAAVKVAEQDSALRLGKEIQPITTTLLDSRLADGGEVEMEVIPMGQDISNTYENPSPMIVDEAMLEKVLGPPRFDDSEAADRVASPGVSVGLVW
TSFGGEVQFVEATAMVGKGDLHLTGQLGDVIKESAQLALTWVRARAADLNLSPTSDINLLESRDIHIHFPAGAVPKDGPSAGVTLVTSLVSLFSHRKVRA
DTAMTGEMTLRGLVLPVGGVKDKVLAAHRYGIKRVILPERNMKDLAEVPAPILSGLEILLVKRIEEVLDHAFEGGCPLRPHSKL

GO Analysis
1
GO Category Molecular Function
GO Term nucleotide binding
2
GO Category Biological Process
GO Term transport
3
GO Category Biological Process
GO Term cellular component organization
4
GO Category Biological Process
GO Term cellular process
5
GO Category Cellular comBiological Processonent
GO Term peroxisome
6
GO Category Molecular Function
GO Term hydrolase activity
7
GO Category Biological Process
GO Term protein metabolic process
8
GO Category Molecular Function
GO Term DNA binding
9
GO Category Biological Process
GO Term metabolic process
10
GO Category Biological Process
GO Term post-embryonic development
11
GO Category Biological Process
GO Term catabolic process
12
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
13
GO Category Cellular comBiological Processonent
GO Term intracellular
14
GO Category Biological Process
GO Term growth
15
GO Category Cellular comBiological Processonent
GO Term cellular_component
Presence of Splice variants YES