LOC_Os09g33780

Expression Profile

RGAP LOCUS ID LOC_Os09g33780
RAP-DB ID Os09g0512700
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Cytoplasmic
score 2.156

3) NUCPRED Prediction
localization Non Nuclear
score 0.23

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.08
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) NEF
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.105
NLS score -0.47
Protein Sequence >LOC_Os09g33780.1 protein
MAMAARARCSRQPNSHRLLAVVVLAAILLLPVASAAAAVVAAVAEGDGVENRSAARQWATGKDEGELVSGEESRGGGSVVEDEFAGGFGSLDSMLQWAIG
NSDPDKLKEQAEGVQKLSADELLKRRMEIKELMEKLKMPSDADLMKIAIADLNNSSISLEDRQRALQELLILVEPIDNANDLDKLGGLVAVIQDLNNANE
EIRTTSAWVLGKASQNNALVQNQILGYGALARLVKMGYATSAEEATKALYAISALVRDNINGQEAFHSENGSAMLQHILASNSVDVRLQKKAVFLVTDLA
DFQLNSGNSGLPFLSDRIFLKSLVDMLSRFDLDLQEKVLLAIKSLLKLSSTEATDFESCDLSSVLYRLGVQLEELPSEEQKEYAGEVDDLRREVQILFQD
KLKEGTKTAL

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Biological Process
GO Term biological_process
3
GO Category Molecular Function
GO Term binding
Presence of Splice variants No