LOC_Os09g31970

Expression Profile

RGAP LOCUS ID LOC_Os09g31970
RAP-DB ID Os09g0492700
Function 3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization PlasmaMembrane
score 1.917

3) NUCPRED Prediction
localization Non Nuclear
score 0.21

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.94
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) HMG2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 2
Number of Bipartite 2
Basic residues % 0.106
NLS score 1.12
Protein Sequence >LOC_Os09g31970.1 protein
MAVEGRRRVPLPLPPPTRRGKQQQQQGGERARRVQAGDALPLPIRHTNLIFSALFAASLAYLMRRWREKIRTSTPLHVVGLAEILAICGLVASLIYLLSF
FGIAFVQSVVSNSDDEEEEEDFLIDSRAAGPVAAQATPPPAPAPFSLLGSACAAPKKMPEEDEEIVAEVVAGKIPSYVLETRLGDCRRAAGIRREALRRT
TGREIRGLPLDGFDYASILGQCCELPVGYVQLPVGVAGPLVLDGERFYVPMATTEGCLVASTNRGCKAIAESGGATSVVLQDGMTRAPVARFPSARRAAE
LKGFLENPANFDTLAMVFNRSSRFARLQRVKCAVAGRNLYMRFSCSTGDAMGMNMVSKGVQNVLDYLQDDFPDMDVISISGNFCSDKKSAAVNWIEGRGK
SVVCEAVIKEEVVKKVLKTNVQSLVELNVIKNLAGSAVAGALGGFNAHASNIVTAIFIATGQDPAQNVESSQCITMLEAVNDGKDLHISVTMPSIEVGTV
GGGTQLASQSACLDLLGVKGANRESPGSNARLLAAVVAGAVLAGELSLISAQAAGHLVQSHMKYNRSSKDMSKVAS

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term lipid metabolic process
4
GO Category Cellular comBiological Processonent
GO Term membrane
5
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
6
GO Category Molecular Function
GO Term protein binding
7
GO Category Biological Process
GO Term metabolic process
8
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants No