LOC_Os09g31470

Expression Profile

RGAP LOCUS ID LOC_Os09g31470
RAP-DB ID Os09g0491708
Function AT hook motif domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 11

2) CELLO Prediction
localization Nuclear
score 3.342

3) NUCPRED Prediction
localization Non Nuclear
score 0.32

4) Y-Loc Prediction
localization Nuclear
score 75.49
confidence value 0.24
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsAHL2|AHL2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 3
Number of Bipartite 0
Basic residues % 0.092
NLS score 1.12
Protein Sequence >LOC_Os09g31470.1 protein
MMEVTQVRASSEMAGGREPFVLPKSPPAAAPAPPPPSSGGMQSVRMAYTADGTPIFAPVNSAPAPAPAATYPPAGGNGAAALDAGEPVVKKKRGRPRKYG
PDGSMSLALVPVSTAAVAASGPFSPAAAAKSPDAVSSAPPPGAKKRGRPKGSTNKKHVPSFGIGDIGSAGAGFTPHVIFVKAGEDVSAKIMSFSQHGTRG
VCVLSANGAISNVTLRQAATSGGTVTYEGRFEILSLSGSFLLSENGGHRSRTGGLSVSLAGPDGRVLGGGVAGLLTAASPVQIVVGSFNTEGKKGPKLHA
PSDPMSAPLKMVPMSGTGPSSPPSRGTLSESSGGPGSPLNQGVTASNHGQPGLPSLSWK

GO Analysis
1
GO Category Molecular Function
GO Term DNA binding
2
GO Category Cellular comBiological Processonent
GO Term cytosol
Presence of Splice variants No