LOC_Os09g27830

Expression Profile

RGAP LOCUS ID LOC_Os09g27830
RAP-DB ID Os09g0451500
Function OsPDIL2-3 protein disulfide isomerase PDIL2-3, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 4

2) CELLO Prediction
localization ER
score 3.405

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.16
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) PDIL2;3
Function assigned as per literature PDIL2;3 is responsible for oxidation of structurally deverse storage proteins in rice
Subcellular localization as per literature ER lumen
Cells used for localization experiment transgenic rice plants
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 21278127
Reference of localization http://www.plantcell.org/content/plantcell/early/2011/01/28/tpc.110.079509.full.pdf
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.111
NLS score -0.47
Protein Sequence >LOC_Os09g27830.1 protein
MRPAVAAALLLVAAAVAASPVSALYSAGSPVLQFNPNNFKSKVLNSNGVVLVEFFAPWCGHCQQLTPIWEKAAGVLKGVATVAALDADAHKELAQEYGIR
GFPTIKVFVPGKPPVDYQGARDVKPIVEFALSQVKALLRDRLNGKTSAGSGGKKSGGSSEKTEPSASIELNSQNFDKLVTKSKDLWIVEFFAPWCGHCKK
LAPEWKKAAKNLKGQVKLGHVDCDAEKSLMSKYKVEGFPTILVFGADKESPFPYQGARVASAIESFALEQLEANAAPPEVSELTGPDAMEEKCASAAICF
VSFLPDILDSKAEGRNKYLELLLSVAEKFKKSPYSFVWTAAGKQADLEKQVGVGGYGYPAMVALNVKKGAYAPLRSAFQLDEITEFVKEAGRGGKGNLPL
DGTPTIVQSEPWDGKDGEVIEEDEFSLEELMADNSPVNDEL

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell wall
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term response to stress
4
GO Category Biological Process
GO Term cellular process
5
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants YES