LOC_Os09g26880

Expression Profile

RGAP LOCUS ID LOC_Os09g26880
RAP-DB ID Os09g0440300
Function aldehyde dehydrogenase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 3

2) CELLO Prediction
localization PlasmaMembrane
score 1.304

3) NUCPRED Prediction
localization Non Nuclear
score 0.07

4) Y-Loc Prediction
localization Cytoplasm
score 64
confidence value 0.53
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsALDH7|OsALDH7B6|ALDH7B7
Function assigned as per literature OsALDH7 plays an important role in maintaining seed viability by detoxifying the aldehydes generated by lipid peroxidation.
Subcellular localization as per literature cytoplasm
Cells used for localization experiment protoplasts purified from Oc suspension cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 19052152
Reference of localization http://www.plantphysiol.org/content/149/2/905.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.086
NLS score -0.47
Protein Sequence >LOC_Os09g26880.1 protein
MGSFARKEHQFLAELGLAPRNPGSFACGAWGGSGPVVTSTNPTNNQVIAEVVEASAREYEEGMRACYDAAKTWMAIPAPKRGEIVRQIGDALRAKLHHLG
RLVSLEMGKILPEGIGEVQEIIDMCDYAVGLSRQLNGSIIPSERPNHMMMEVWNPLGVVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIA
MTKIVASVLERNNLPGSIFTAFCGGADIGQAISLDTRIPLVSFTGSTKVGLMVQQQVNARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQR
CTTCRRLLLHESIYRTFLDQLVEVYKQVRIGDPLENGTLLGPLHTPASRDAFLKGIQTIRSQGGKILYGGSAIESEGNFVQPTIVEISPSAPVVREELFG
PVLYVMKVQNLKEAVEINNSVPQGLSSSIFTKRPDIIFKWIGPHGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRATCTINYGSEL
PLAQGINFG

GO Analysis
1
GO Category Molecular Function
GO Term catalytic activity
2
GO Category Cellular comBiological Processonent
GO Term cytosol
3
GO Category Biological Process
GO Term response to stress
4
GO Category Biological Process
GO Term response to abiotic stimulus
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Biological Process
GO Term response to endogenous stimulus
Presence of Splice variants YES