LOC_Os09g26190

Expression Profile

RGAP LOCUS ID LOC_Os09g26190
RAP-DB ID Os09g0431600
Function CBS domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 4

2) CELLO Prediction
localization PlasmaMembrane
score 3.139

3) NUCPRED Prediction
localization Non Nuclear
score 0.12

4) Y-Loc Prediction
localization Cytoplasm
score 58
confidence value 0.15
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCBSPPR1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.104
NLS score -0.47
Protein Sequence >LOC_Os09g26190.1 protein
MDEVGAARRRAVDRGAGAGAGLNTIVMNAVLEACVRCGDVGLALSLFDEMRGPGGCGVDGVSYGILLKGLGIARRIDDAFEILESIEKDTSIGSPRLSPH
LICGFLNALIEAGWYKIYLFIFQYIIVIRILGCTGDMRRANALVARFRQVLYEGHSVLLYNLLMKGYIKSNFPLGALTVKDEILRQGLKPDRLTYNTIIS
ACVKSAEIDMAIRFLEDMKEEAKRDNNPELLPDAVTYTTLLKGLGNSQDLYSVLKIVVEMKSAPISIDRTAYTAMVDALLACGSINGALCIFGEIIKQAG
NNKDLRPKPHLYLSIMRAFATIGDLDMVKRLNKRMWPDSVGSISRSAKEEADELLMEAALNNNQVHDVSLFDYKYILPIFHIIIDGHTTNTANFLKSIIG
FSKLYLKASQVVAVKVETLSGFTNSLLRPHVFPQIVLNDPVEKYMIPFQETQPLHADLILEEVVMRFFKDPVVPIVDDWGSCVGIVHRQDCTKIDAPLLS
MSRGPPLCVPTSTSVEHVIDLLLREKSEMVVVVKRGNMYEGSYASSSRPLGVFSLAILWKFTADATDIDGMDAAHQLQQDVEASNCG

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cytosol
2
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No