LOC_Os09g24440

Expression Profile

RGAP LOCUS ID LOC_Os09g24440
RAP-DB ID Os09g0409950
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 10

2) CELLO Prediction
localization Nuclear
score 3.469

3) NUCPRED Prediction
localization Nuclear
score 0.86

4) Y-Loc Prediction
localization Nuclear
score 99.76
confidence value 0.99
Number Of Software Predicting Nucleus 4
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) qCTS-9
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 5
Basic residues % 0.133
NLS score 2.37
Protein Sequence >LOC_Os09g24440.1 protein
MAKARKQKGEEQKPDGGGAGGGGGGATVLHQKLCLSIDMENRLIYGYTEIKVQAENDTFALHADNMTIRNILVDGQAAEFEYSPQWKNAGDQQSWSSVSC
SKTAADAACSVYISSLNSEAAPNLIISSERSSKAITEPQYEENGENHEENGEKHEENGEKQNENGEKCEENGGKPAQISDDQAVNGCNGSADKKDKEEET
EKDNEKEKEDKEEETEKDNEKEKEDKEEETKKDNEKEKEQLMGTDEKEKEKEKEDENEEEKLEEEEKKDKEEKLEEKEKENEEENGNEKDKENDNEIEKV
KNTKLVHIDYILEKAETGLYFTGNILHSNNQIRRAHCWFPCIDSATQRCPFDLEFTVSTNLVAVSNGDLLYQVLSKEDPPRKTYVYKLSTPVSAQWISLV
VGPFEVLPDRNDISVSHMCLSQSLSKLENTISFFHSVYSCYEDYLAASFPFGLYKQVFLPPEMIVSPTSLGASTCIFNSDILHDEKVIDQIIDTRIKVAY
ALARQWFGIYTNAEEATDEWLLDGLAGFLTEHFVKRYLGNNEARYRRFKDVAADLTIFTLLLKPVHESYVAHSFGVDSHINLSFTFQPNSLANYVFASCL
AFIHLNLNGWCRAANCIVCEFDVSGATALSSPSASSDLFGTQTIGSYGKIRSLKAVSVLQMLEKQMGPDSFRKILQMIVAPTRASRTLSTKEFRHLANKV
GNLERPFLKEFFPRWVESSGCPVMRLGISYSKRRNLVELAVSRGCTTKVDPGPDIRTNGDSREGDTGWPGMMSVRVHETDGVYDHPIVPMAGEALQVVEI
QCHSKVAAKRFQKTKKGSKPDGSDENIDASNQDNRASMDAPLLWIRVDPEMEYLAEIHFHQPVQMWINQLEKDKDVISQSQAISVLEKSPQLTFAVTNAL
NNFLNDTKAFWRVRVEAAYALAVTASEGTELTGLLHLVKFYKSRRFDADIGLPRPNDFHDIPEYFVLEAIPHAVALVRSADKSSPKEAIEFILQLLKYND
NNGNVYSDVYWLSAMVQAIGELEFGQQGVGLLSSLLKRIDRLLQFDNFMPGYNGVLTVSCIRTLARIAQRVSSSICLDRVCELIVPYRNMDKPWKVRMEA
GRVLIDLEFHHKGLDAALLLFLKYANEERSLRVGLLCLLAGKKAYNNVYLRHNVFCILQIAAGRSPTLHGVPKVVTPPQVVLEISSDQHTKADSSVPQQS
RPQEPSTSTPSVREVLPTSGPLKDADNISNCSERRNVIFIPTKDADNISNCSERRNVISIPTKDADNISNCSERRNVVKIRVKRASSSSKADDADHRDHS
HGRNENEAGPCSSMSVDAPMTEAPEPVNVSNHNIEEQNSCHDREQNSCHDRESRMSASIGNVKLMDKHEVSKELQCTADSRLDALPKDHFSPVVNGQEVL
DKPRSQLEVVSTSYDGNQAPDSMNGLETKEKKKDKKDKKRHRDKKDDPEYLEKKRLKKEKKRMEKEKGKKQKEGEGVSSSEQKNTAKPSDSQGTSSARPP
APMRIPEPKISNVGTPVDTTRTLTTTKIRIKVKPLQR

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Molecular Function
GO Term hydrolase activity
3
GO Category Cellular comBiological Processonent
GO Term cellular_component
4
GO Category Molecular Function
GO Term binding
Presence of Splice variants No