LOC_Os09g19930

Expression Profile

RGAP LOCUS ID LOC_Os09g19930
RAP-DB ID Os09g0363900
Function HOTHEAD precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization Extracellular
score 1.494

3) NUCPRED Prediction
localization Non Nuclear
score 0.16

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.2
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) ONI3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.092
NLS score -0.47
Protein Sequence >LOC_Os09g19930.1 protein
MALSKRMLFIFQAMVCLCSFSLSQGNQQFSLRNLPTLQKASSFPAMRHETYDYIVVGGGTAGCPLAATLSLKYKVLLLERGGSPYGNRNVSYMENFHIGL
SNMAPDSASQAFISTDGVINARARVLGGGTCINAGFYSRASSNFIQEVGWDEDLVNESFPWVEDKIVQWPKIAPWQAALRDGLLQAGVSPFNGYTYDHVS
GTKVGGTIFDETGYRHTAADLLAAGDPNNLRVLLHASVNRIVFNSQRGQLKPRATGVQFTDENGGLHQAFLNSNCDSEIIVSAGAIGSPQLLLLSGIGPK
NDLRSHKIPVVLHNKYVGKGMADNPMNSIFIPTKSPPRQSLIETVGITEAGVFIEASSGFGQSPESIHCHHGIMSAEIGQLSTIPPKERSLEKAQKYANT
KLNLPKEIFHGGFILEKIDGPLSTGHLALIDTDVKKNPAVTFNYFSHPQDLTRCVYGIKTIERILKTNRFSELSANTDGHSMERVLNMSVQANVNLIPKH
TNDTESLEQFCRDTVITIWHYHGGCHVGKVVDQQHRVLGVSGVRVVDGSTFSRSPGTNPQATVMMMGRYFGVMILRGRLGRAAGV

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term lipid metabolic process
4
GO Category Molecular Function
GO Term catalytic activity
5
GO Category Molecular Function
GO Term binding
6
GO Category Biological Process
GO Term cell-cell signaling
7
GO Category Cellular comBiological Processonent
GO Term extracellular region
8
GO Category Biological Process
GO Term multicellular organismal development
Presence of Splice variants No