LOC_Os09g16330

Expression Profile

RGAP LOCUS ID LOC_Os09g16330
RAP-DB ID Os09g0332700
Function pleiotropic drug resistance protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 12

2) CELLO Prediction
localization PlasmaMembrane
score 4.663

3) NUCPRED Prediction
localization Non Nuclear
score 0.36

4) Y-Loc Prediction
localization Nuclear
score 97.28
confidence value 0.63
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPDR20
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.095
NLS score -0.13
Protein Sequence >LOC_Os09g16330.2 protein
MDDAGEIHALGGSLRREASSARSGDAAVFFSRSSSRDEDDEEALRWAALEKLPTYDRARTAVLAMPEGELREVNVQRLGPQERHALLQRLAWVGDDHARF
LSKFKDRVDRVGIELPTIEVRYENLNVEAEAYVGSRGLPTILNTYANVLEGLANTLHITPNRKQKISILHNVSGIIKPHRMTLLLGPPGAGKTTLLLALA
GNVPSGLKVSGQITYNGHTMDEFEPRRSAAYVSQHDLHMGELTVRETVNFSAKCQGIGHRYDLLMELSRREKEENIKPDPEVDIYLKAAATGEQKAEVVT
NHILKVLGLDICADTIVGNNMLRGISGGQKKRVTTGNMIVTPGRALFMDEISTGLDSSTTYNIVDSIRQTIHIVGGTAVIALLQPAPETYELFDDIILLS
DGQVVYNGPREHVLEFFESVGFKCPERKGVADFLQEVTSRKDQRQYWMHGDETYRYVPVKEFAEAFQSFHVGQAIRSELAIPFDKSRSHPAALKTSKYGA
SMKELLKANIDREILLMKRNSFVYIFKATQLTLMTFIAMTVFIRTNMHHDSITNGGIYMGALFFGILMIMFNGLAEVGLTIAKLPVFFKQRDLLFYPAWT
YSLPSWIIKTPLSLLNVTIWVFITYYVIGFDPNVERLFRQFLLLLVMNETSSGLFRFIAGFARHQVVASTMGSFCILIFMLLGGFILSRENVKKWWIWGY
WISPLMYAQNAISVNEFLGHSWNKTIPGFREPLGKLVLESRGVFPEAKWYWIGVGALLGYVLLFNILYTICLTFLNPFDSNQPTISEETLKIKQANLTGD
VIEASSRGRITTNTNTADDSNDEAISNHATVNSSPGKKGMVLPFVPLSITFEDIRYSVDMPEVIKAQGVTESRLELLKGISGSFRPGVLTALMGVSGAGK
TTLMDVLAGRKTSGYIEGNITISGYPKKQETFARVSGYCEQNDIHSPNVTVYESLAFSAWLRLPAEIDSATRKMFIDEVMELVELSPLKDSLVGLPGVSG
LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAIRNTVDTGRTVVCTIHQPSIDIFESFDELFLMKRGGEEIYVGPVGQHSCELIRYFESI
EGVSKIKHGYNPSTWMLEVTSTVQEQITGVNFSEIYKNSELYRRNKSMIKELSSPPDGSSDLSFPTEYSQTFITQCLACLWKQSLSYWRNPPYTAVKYFY
TIVIALLFGTMFWGVGRKRSNQQDLFNAMGSMYASVLFMGVQNSSSVQPVVSVERTVFYRERAAHMYSPLPYALGQVAIELPYILVQSLIYGVLVYAMIG
FEWTAAKFFWYLFFMYFTLSYYTFYGMMSVGLTPSYNVASVVSTAFYAIWNLFSGFIIPRTRIPIWWRWYYWVCPVAWTLYGLVTSQFGDVTDTFDNGVR
ISDFVESYFGYHRDFLWVVAVMVVSFAVLFAFLFGLSIKIFNFQKR

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Molecular Function
GO Term hydrolase activity
3
GO Category Molecular Function
GO Term transporter activity
4
GO Category Biological Process
GO Term catabolic process
5
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
6
GO Category Biological Process
GO Term transport
7
GO Category Biological Process
GO Term cellular process
Presence of Splice variants YES