LOC_Os09g15670

Expression Profile

RGAP LOCUS ID LOC_Os09g15670
RAP-DB ID Os09g0325700
Function protein phosphatase 2C, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 8

2) CELLO Prediction
localization Chloroplast
score 2.037

3) NUCPRED Prediction
localization Non Nuclear
score 0.34

4) Y-Loc Prediction
localization Nuclear
score 45.58
confidence value 0.05
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSIPP2C1|OsPP2C68|OsPP108
Function assigned as per literature OsSIPP2C1 negatively regulated by ABL1 is involved in abiotic stress and panicle development in rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment  rice protoplast cell
NUCLEAR or Not Nuclear NUCLEAR
PMID 23086454
Reference of localization https://link.springer.com/article/10.1007/s12033-012-9614-8
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.131
NLS score 0.15
Protein Sequence >LOC_Os09g15670.1 protein
MSMAEVCCDSAVVVGAEAEARARARAGRRRRAGVEGAGRWNATATAAGVAAEEAATRKRRASGGEAGLVVVAKRHGAASVAGRRREMEDAVSLREAFAAP
ANGEVAAARCDFYGVFDGHGCSHVADACRERMHELVAEEMGAGSPAAAAREPASWTETMERSFARMDAEVIAGCRAESGSCRCEGQKCDHVGSTAVVAVV
EESRVVVANCGDSRAVLCRGGAPVQLSSDHKPDRPDELERIEAAGGRVIFWEGARVLGVLAMSRSIGDAYLKPYVTAVPEVTVTGRSDFDECLILASDGL
WDVVSNEAACEVAQSCLRRGRQRWCAEAAAVLTKLALARRSSDNISVVVVDLRRGNAL

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Biological Process
GO Term protein modification process
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term cellular process
5
GO Category Molecular Function
GO Term catalytic activity
6
GO Category Molecular Function
GO Term hydrolase activity
Presence of Splice variants No