LOC_Os09g15430

Expression Profile

RGAP LOCUS ID LOC_Os09g15430
RAP-DB ID Os09g0323100
Function zinc finger family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 6

2) CELLO Prediction
localization PlasmaMembrane
score 4.48

3) NUCPRED Prediction
localization Non Nuclear
score 0.45

4) Y-Loc Prediction
localization Nuclear
score 99.65
confidence value 0.82
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsHTAS
Function assigned as per literature OsHTAS enhanced heat tolerance by promoting H2O2 accumulation-induced stomatal closing in rice
Subcellular localization as per literature Nucleus and the cytoplasm
Cells used for localization experiment Rice protoplasts and Nicotiana benthamiana epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 26564152
Reference of localization http://www.plantphysiol.org/content/170/1/429.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 3
Number of Bipartite 0
Basic residues % 0.087
NLS score 0.81
Protein Sequence >LOC_Os09g15430.3 protein
MEHATCDDVHEHAINVSHGETASTSTSHQDLHSDSDDSHQDDRPSTSTQTPSPQSSASTSPTAYNTRNLSFPRRDSMYGHGRSIWNSGLWISFELVIYVV
QIVAAIFVLVFSRDEHPHAPLFAWIIGYTIGCIASIPLICWRCAHRNRPSEQEPEQPPAAYPNLTSSQSSEGRNQRSSGTVLHFGCITISCPRPSILAYH
FKTAVDCFFAVWFVVGNVWIFGGHSTLSDSQEAPNMYRLCLAFLALSCVGYAIPFVMCAAICCCFPCLISLLRLQEDLGHTRGATQELIDALPTYKFKPK
RSKMWVDHASSSENLSEGGILGPGTKKERIVSAEDAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEIGGVVRSFFGLPFGRRRVD
RMAGRGIASSRFTV

GO Analysis
1
GO Category Molecular Function
GO Term binding
2
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants YES