LOC_Os09g13630

Expression Profile

RGAP LOCUS ID

LOC_Os09g13630

RAP-DB ID

Os09g0306800

Function

ZOS9-03 - C2H2 zinc finger protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization

Nuclear

score

2) CELLO Prediction

localization

Nuclear

score

4.066

3) NUCPRED Prediction

localization

Nuclear

score

0.96

4) Y-Loc Prediction

localization

Nuclear

score

99.94

confidence value

0.94

Number Of Software Predicting Nucleus

Seed Specific

Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020)

OsEMF2b

Function assigned as per literature

OsEMF2b plays an essential role during post-meiotic anther and pollen development

Subcellular localization as per literature

nucleus

Cells used for localization experiment

rice leaf protoplasts

NUCLEAR or Not Nuclear

NUCLEAR

PMID

29250087

Reference of localization

https://www.frontiersin.org/articles/10.3389/fpls.2017.01998/full

Is Subcellular localization evidence by author available ?

Sequence Analysis

Number of PAT4

Number of PAT7

Number of Bipartite

Basic residues %

0.114

NLS score

0.78

Protein Sequence

>LOC_Os09g13630.1 protein
MCRHQPRARLSPDEQLAAEESFALYCKPVELYNIIQRRSIKNPAFLQRCLLYKIHARRKKRSLITISLSGGTNKELRAQNIFPLYVLLARPTNNVSLEGH
SPIYRFSRACLLTSFHEFGNKDYTEATFVIPDVKNLATSRACSLNIILISCGRAEQTFDDNNCSGNHVEGSTLQKLEGKCFWGKIPIDLLASSLGNCVSL
SLGHTVEMSSTVEMTPSFLEPKFLEDDSCLTFCSQKVDATGSFQLQVSISAQEAGAKDMSESPYSVYSYNDVPPSSLTHIIRLRSGNVLFNYKYYNNTMQ
KTEVTEDFSCPFCLVPCGSFKGLGCHLNASHDLFHYEFWISEECQAVNVSLKTDSWRTELLAEGVDPRHQTFSYRSRFKKRKRVEISSDKIRHVHPHIVD
SGSPEDAQAGSEDDYVQRENGSSVAHASVDPANSLHGSNLSAPTVLQFGKTRKLSVERADPRNRQLLQKRQFFHSHRAQPMALEQVFSDRDSEDEVDDDI
ADFEDRRMLDDFVDVTKDEKLIMHMWNSFVRKQRVLADGHIPWACEAFSQFHGQELVQNPALLWCWRFFMVKLWNHSLLDARAMNACNTILEGYLNGSSD
PKKN

GO Analysis

GO Category	Biological Process
GO Term	flower development

GO Category	Molecular Function
GO Term	DNA binding

GO Category	Cellular comBiological Processonent
GO Term	nucleus

GO Category	Molecular Function
GO Term	protein binding

GO Category	Biological Process
GO Term	biosynthetic process

GO Category	Biological Process
GO Term	nucleobase, nucleoside, nucleotide and nucleic acid metabolic process

GO Category	Biological Process
GO Term	regulation of gene expression, epigenetic

GO Category	Molecular Function
GO Term	sequence-specific DNA binding transcription factor activity

Presence of Splice variants