LOC_Os09g09370

Expression Profile

RGAP LOCUS ID LOC_Os09g09370
RAP-DB ID Os09g0266600
Function BTBN18 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 domain, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 7

2) CELLO Prediction
localization Cytoplasmic
score 1.51

3) NUCPRED Prediction
localization Non Nuclear
score 0.31

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.11
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) BTBN18
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.124
NLS score 0.13
Protein Sequence >LOC_Os09g09370.2 protein
MYESFLIKDIKKFFTMKYMKLGTKPDTFYTEEAVRSVLSDVPADLIIHVNNTKYQLHKFPLLLKCGLLQRLCSDDDGVDGVDAAPVPVALHDIPGGEEAF
ELCAKFCYGISINIGAGNFVAAALAARFLRMTEAVAKGNLVAKLDSFFDSCILQGWKDPIAALTAAWRISGWSESRIVQPCVDAIVEKILTPPSKVTWSY
TYTRPGYAKKAHQSVPKDWWTEDVSELDIDVFRSLLSTVCAARLLPPPLIGEALHVYACKHLPDPLNHAAAAATANGQSSELETAAAKQRRVLETIVTMI
PGDAGAVTGRFLLRLLRVASYVGASPSTRAQLVRQAGAQLDEARAVDLLVPMPSSSDPPAYDVGAAEAVLEHFLALFQRPAPPDERRRMSAAMEKVARTF
DEYLRAVALHADFPVGKFVDLAECLPDIARNDHDGLYHAIDTYLKEHPELSKADKKRLCRMIDCRKLSPDVRAQAISNDRMPLRTIVQLLFVEQERAMGG
GGASGSNSAVAPDAIAMLAARKEKEDEPPAPAADHKSDVHRPRGDHGERARADGAAMTRSLSASTTKTAGAAAPRTAESRGSRMRNK

GO Analysis
1
GO Category Biological Process
GO Term signal transduction
2
GO Category Biological Process
GO Term response to abiotic stimulus
3
GO Category Molecular Function
GO Term signal transducer activity
Presence of Splice variants YES