LOC_Os09g07294

Expression Profile

RGAP LOCUS ID LOC_Os09g07294
RAP-DB ID Os09g0247700
Function purity of essence, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 7

2) CELLO Prediction
localization Nuclear
score 2.494

3) NUCPRED Prediction
localization Non Nuclear
score 0.54

4) Y-Loc Prediction
localization Nuclear
score 98.8
confidence value 0.88
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsBIG
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.112
NLS score -0.47
Protein Sequence >LOC_Os09g07294.1 protein
MEPAEGILLIVESLTMEANESDISIAQSVFTTTTEETGAGEEAKKIVLMFLERLCPPDGAKKSNKQQRNEEMVARILPNLTYGEPAAMEALVLHFEPYLM
NWSEFDQLQKQHEENPKDETLSKNASMQRSAVENFVRVSESLKTSSCGERLKEIILEKGITKAAVGHLRESFASAGQASFRTSAEWTVGLKLPSIPLILS
MLKGLAKGDLPTQKCVDEEDILPLLHALEGVPGENEIGARAENLLDTLANKENNGDGFLAEKIQELRHATRDEMRRRALKKREMLLQGLGMRQEFASDGG
RRIVVSQPIIEGLDDVEEEEDGLACMVCREGYTLRPTDMLGVYAFSKRVNLGATSSGSGRGDCVYTTVSHFNIIHYQCHQEAKRADAALKNPKKEWDGAT
LRNNETLCNCIFPLRGPSVPPGQYTRCLDQYWDQLNSLGRADGSRLRLLTYDIVLMLARFATGASFSTDCKGGGRESNSRFLPFMIQMASHLVDGSANQQ
RHVMAKAVTSYLSSSPSTPESPVRLSALSGARGGSGSSEETVQFMMVNSLLSESYESWLQHRPAFLQRGIYHAYMQHKHGRSTLKLSADTSSSAVRSDEG
SSADSNDSKRLFAIVQPMLVYTGLIEQLQQFFKKGKSSGTQKVGEKDGSSGGNLEAWEIMMKEKLGNMKEMLGFSKDVLSWLEDMTSSEDLQEAFDVMGA
LPDVFSGGHTTCEDFVRAIIHGAKS

GO Analysis
1
GO Category Biological Process
GO Term reproduction
2
GO Category Biological Process
GO Term anatomical structure morphogenesis
3
GO Category Biological Process
GO Term post-embryonic development
4
GO Category Cellular comBiological Processonent
GO Term membrane
5
GO Category Biological Process
GO Term response to endogenous stimulus
6
GO Category Biological Process
GO Term cellular component organization
7
GO Category Biological Process
GO Term cell growth
8
GO Category Biological Process
GO Term response to biotic stimulus
9
GO Category Cellular comBiological Processonent
GO Term cellular_component
10
GO Category Biological Process
GO Term protein modification process
11
GO Category Biological Process
GO Term multicellular organismal development
12
GO Category Biological Process
GO Term response to abiotic stimulus
13
GO Category Molecular Function
GO Term binding
14
GO Category Molecular Function
GO Term catalytic activity
15
GO Category Biological Process
GO Term transport
16
GO Category Cellular comBiological Processonent
GO Term cytosol
Presence of Splice variants No