LOC_Os09g02650

Expression Profile

RGAP LOCUS ID LOC_Os09g02650
RAP-DB ID Os09g0114500
Function kinesin motor domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8

2) CELLO Prediction
localization Nuclear
score 3.142

3) NUCPRED Prediction
localization Nuclear
score 0.87

4) Y-Loc Prediction
localization Cytoplasm
score 99
confidence value 0.82
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) BC12
Function assigned as per literature controls cell‐cycle progression and wall properties in rice
Subcellular localization as per literature nucleus and the periphery of cytoplasm
Cells used for localization experiment rice protoplast
NUCLEAR or Not Nuclear NUCLEAR
PMID 20444225
Reference of localization https://onlinelibrary.wiley.com/doi/abs/10.1111/j.1365-313X.2010.04238.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.152
NLS score 0.33
Protein Sequence >LOC_Os09g02650.1 protein
MTMEHGEDCCVKVAVHVRPLIGDEKLQGCKDCVSVVSGKPQVQIGSHSFTFDHVYGSSGTPSAAMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMG
TACKEGSHIGIIPRAMATLFDKIDKLKNQVEFQLRVSFIEILKEEVRDLLDPATAAVGKLENGNGHATKLSVPGKPPVQIREASNGVITLAGSTEVHVTT
QKEMTACLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKADPIMTLDGMPIEEMNEDYLCAKLHLVDLAGSERAKRTGSDGLRFKEGVHINRGLLAL
GNVISALGDEKKRKEGAHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEETLNTLKYANRARNIQNKPIVNRNPVADEMKRMRQQIEYLQAELVS
ARGGVVLDDVQGLRERISMLEQKNEDLCRELYDLRNHGYTDPCEPELQKIGTGYTKGEGLKRSLQSTEPFDVPMTDSVRAGSPKDIDDEVAKEWEHTMLQ
DSMGKELNELNRQLEQKESEMKMYGSDTVALKQHFGKKLLELEEEKRAVQQERDRLLAEVESLNADGQTHKLRDAQLQKLKTLEAQILDLKKKQENQVQL
LKEKQKSDEAAKKLQEEIHSIKAQKVQLQHKIKQEAEQFRQWKATREKELLQLRKEGRRNEYERHKLQALNQRQKLVLQRKTEEAAMATKRLKELLEARK
SSGRDNSGMNGTSPGSHMTEKSLQKWLEQDLEVMVHVHEVRNEYEKQSQLRAALGEELAILKQEDVMSGAASPPRGKNGNSRANTLSPNARQARIASLES
MVTISSNTLVAMASQLSEAEERERAFSGRGRWNQLRSMAEAKSLLQYIFNVAADARCQVREKEMEIKEMKEQMTELVTILRHSESRRRETEKQLKQREQA
AVTATTSPGNGNGSVKHSADDSNTPLSPVAVPAQKQLKYSAGIVNSPSKGVPAFNKQHLKMVPMAQLPVGKKVSIAGQSGKLWRWKRSHHQWLLQFKWKW
QKPWKLSEMIRHSDETMTRTRPRPQLLPHRPQRVM

GO Analysis
1
GO Category Biological Process
GO Term cellular component organization
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Molecular Function
GO Term motor activity
5
GO Category Cellular comBiological Processonent
GO Term cytoplasm
Presence of Splice variants No