LOC_Os09g02180
| RGAP LOCUS ID | LOC_Os09g02180 |
| RAP-DB ID | Os09g0109600 |
| Function | expressed protein |
Sub-cellular Localization Predictions |
|
1) WoLF-PSORT Prediction |
|
| localization | chlo |
| score | 6 |
2) CELLO Prediction |
|
| localization | Nuclear |
| score | 2.211 |
3) NUCPRED Prediction |
|
| localization | Non Nuclear |
| score | 0.09 |
4) Y-Loc Prediction |
|
| localization | Secreted pathw |
| score | |
| confidence value | 0.41 |
| Number Of Software Predicting Nucleus | 1 |
| Seed Specific | No |
| Transcription factor category | |
Experimental evidence for subcellular localization |
|
| Published gene name (updated 1 January 2020) | OsDSSR1 |
| Function assigned as per literature | OsDSSR1 enhances drought tolerance in rice |
| Subcellular localization as per literature | Cytoplasm and the nucleus |
| Cells used for localization experiment | Rice protoplast cells |
| NUCLEAR or Not Nuclear | NUCLEAR |
| PMID | 29576089 |
| Reference of localization | https://www.sciencedirect.com/science/article/pii/S0168945217308300 |
| Is Subcellular localization evidence by author available ? | No |
Sequence Analysis |
|
| Number of PAT4 | 0 |
| Number of PAT7 | 0 |
| Number of Bipartite | 0 |
| Basic residues % | 0.12 |
| NLS score | -0.47 |
| Protein Sequence | >LOC_Os09g02180.1 protein MSSTNTTSNDPKTTKDELAPPAPTAAEHGGGKDAVTKTVQTVEVKESVGQEPVLKPTKVVHQIPADQAKDAPKQD |
GO Analysis |
|
| Presence of Splice variants | No |