LOC_Os08g44840

Expression Profile

RGAP LOCUS ID LOC_Os08g44840
RAP-DB ID Os08g0562500
Function transferase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 13

2) CELLO Prediction
localization PlasmaMembrane
score 1.292

3) NUCPRED Prediction
localization Non Nuclear
score 0.03

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.2
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) SLG
Function assigned as per literature SLG participates in BR homeostasis
Subcellular localization as per literature Nucleus and cytoplasm
Cells used for localization experiment Rice protoplast
NUCLEAR or Not Nuclear NUCLEAR
PMID 27252468
Reference of localization https://academic.oup.com/jxb/article/67/14/4241/2197719
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.09
NLS score -0.47
Protein Sequence >LOC_Os08g44840.1 protein
MAAVDNAPPSPVVTVTSTRTVAPAAAKCVLATFDLPYITFYYNQKLLLYRLPNGASDFPDAVARMSASLSDALAYFYPLAGRIRQDDHDGSLSIHGQHGA
EVIEASADHVSVDQLAGEECSEEAEKVMQLLVPYTGVMNLEGLNRPLLAVQLTRLRDGVAVGCAFNHAVLDGTSTWHFMTSWAELCRGGGAPSLLPVHNR
GMARSVRVNLPLPASAEAHEKTDPNGPKVPLVARVFSFPPSAVARAKAAANAALPPGAKPFSSFQSLAAHIWRAVSRARALGPSDITVFAVFADCRARLS
PPLPPAYFGNLIQAVFTGVPAGMLLAGPPELAAGLLQKAIDDHDAAAITRRLEEYEAAPKLFHYSDAGPNCVAVGSSPRFRVYDVDFGFGRPERVRSGAN
NKFDGMVYLYPGRGGDGGIDVELSLQPEPMQRLDKDQDFLQMRAP

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term anatomical structure morphogenesis
3
GO Category Biological Process
GO Term cellular component organization
4
GO Category Biological Process
GO Term cell differentiation
5
GO Category Biological Process
GO Term multicellular organismal development
6
GO Category Cellular comBiological Processonent
GO Term cytoplasm
7
GO Category Biological Process
GO Term biosynthetic process
8
GO Category Biological Process
GO Term cellular process
9
GO Category Biological Process
GO Term lipid metabolic process
10
GO Category Biological Process
GO Term biological_process
11
GO Category Molecular Function
GO Term transferase activity
12
GO Category Biological Process
GO Term reproduction
13
GO Category Biological Process
GO Term post-embryonic development
14
GO Category Biological Process
GO Term embryo development
Presence of Splice variants No