| RGAP LOCUS ID |
LOC_Os08g44280 |
| RAP-DB ID |
Os08g0557000 |
| Function |
protein-L-isoaspartate O-methyltransferase, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
mito |
| score |
8 |
2) CELLO
Prediction
|
| localization |
Cytoplasmic |
| score |
1.792 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.03 |
4) Y-Loc
Prediction
|
| localization |
Chloroplast |
| score |
6 |
| confidence value |
0.14 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsPIMT1 |
| Function assigned as per literature |
OsPIMT1 is involved in seed longevity improvement |
| Subcellular localization as per literature |
Chloroplast and nucleus |
| Cells used for localization experiment |
rice protoplast |
| NUCLEAR or Not Nuclear |
NOT NUCLEAR |
| PMID |
26438231 |
| Reference of localization |
https://link.springer.com/article/10.1007%2Fs11103-015-0383-1 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.092 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os08g44280.1 protein
MLLFFSGKNRFMLLLVLILLQHRLWSSGASDKNKAMVEQLQRYGIIKSSKVAQVMETIDRGLFVPPGASPYFDSPMPIGYNATISAPHMHASCLELLEKH
LQPGMRALDVGSGTGYLTACFAIMVGPEGRAVGVEHIPELVTSSIENIKKSAAAPQLTDGSLSIHITDGREGWPELAPYDAIHVGAAAPQIPQALIEQLK
PGGRMVIPVGTMFQELKVVDKNQDGKVSIRDETAVRYVPLTSKDAQLQAN |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
post-embryonic development |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
protein modification process |
|
| 3 |
| GO Category |
Molecular Function |
| GO Term |
transferase activity |
|
| 4 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytoplasm |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
response to endogenous stimulus |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
biological_process |
|
| 7 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytosol |
|
| 8 |
| GO Category |
Biological Process |
| GO Term |
response to stress |
|
| 9 |
| GO Category |
Biological Process |
| GO Term |
response to abiotic stimulus |
|
| Presence of Splice variants |
YES |
