LOC_Os08g43130

Expression Profile

RGAP LOCUS ID LOC_Os08g43130
RAP-DB ID Os08g0544500
Function NAP1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 6

2) CELLO Prediction
localization PlasmaMembrane
score 2.657

3) NUCPRED Prediction
localization Non Nuclear
score 0.62

4) Y-Loc Prediction
localization Cytoplasm
score 84
confidence value 0.56
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) LPL3|DS8
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.104
NLS score -0.47
Protein Sequence >LOC_Os08g43130.1 protein
MAHVSFKSKEADSMSRWSKYLSTEESPPSASLSWRAMGVDGPQGSASGQKHLQMEPVVQLSKVAEGLLAKMYRLNSILDYPDPNAHTFSEAFWKAGVMPN
FPKICITLSKKFPEHPNKLQLEKVDKFALDALNENAEGYMQNLEQWITLLLDLLEFREQALRLILDLSSTVITLLPHQNSLILHAFMDLFCSFVRVNLFS
DKIPRKMILQVYNILHIMLKGGRDCEFYHRLVQFVDLYDPPVKGLHEDLNFVSPRIGEVLEAVGPIIFLSTDTKKLRNEGFLSPFHPRYPDILTNSAHPM
RAQDLANVTSYREWVLLGYLVCPDELLRVTSIDVAMVVLKENLVLSLFRDEYILLHENYQLYVLPKVLESKRMAKSGRTKQKEADLEYNVAKQVEKMLME
VHEQALVSADALHHERRILLKQEIGRMVLFFTDQPSLLAPNIQMVFSALALAQCEVVWYFQHVGIASSKSSRGRTVDIDAADPTIGFLLDGMGKLCCLVR
KYIAAIKGYALSYLSSCAGRIRFLLGTPGMVALDLDATLKGLFQQVLHCLENIPKPQGENVPAITCDLTDLRKHWLSILMIVTSSRSSVNIRHLEKATVS
TGKEGLVSEGNAAYNWSRCVDELEGQLSKHGSLKKLYFYHQHLTTVFRNTMFGPEGRPQHCCAWLGAACCFPECASSIIPEEVNKIGRDSISYVESLIES
IMGGLEGLINILDSEGGFGSLEMQLSPEQAAIRLNNATRAKAVSGLLAPGHESYPDNSSSVKMLEAAMQRLTSLCSVLNDMEPICVLNHVFILREYMRDC
IIGNFRRRFHSMIRTDSCLQRPSVIESLLRRHLSIIHLAEQHISMDLTEGIREVLLAESFTGPFPNLQVFETPTETHGGGSAIDIISNWYIDNFVKDASR
TGVVFDASQNCFRSSQPIGGGYLAEAFTDKRELKALVRLFGGYGVDRLDKLLREHTSALLNCIDSALRSNRDALEGLAGSVNSGDRIERDANLKQIIDIE
TLADFCIQAGQAITFRRLLVEAVGAVLEEKVPLIYSLLKGLAMQLPEEVPDKNEIIRLRRVASSVGVGDKHDAEWVHSILAEIGSANDNSWTLLPYLCAA
FMASNMWSTTAYDVNTGGFSNNLHCLARCVSAVVGGSEYTRMEREHRRSSLSNGHMDELQEPELLSRVSAEANIKSAMQLYVKLSAGLVLDSWNDTSRPY
IVPKLIFLDQLCEMSPYLPRSTLEVHIPYTILRSIYHQLYGASLMATEPMEPSPRQSPLISLAHASPSMKQNRADTTPRSHTFEPGYHSSSGSQYDEGYE
GDRRTGERQLRSMRRSGPLDYTGTRKVKFVEGSSSGSHGAGSGSLQRFAVSRSGPLSYK

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cytoplasm
2
GO Category Biological Process
GO Term cell growth
3
GO Category Biological Process
GO Term cellular component organization
4
GO Category Biological Process
GO Term cellular process
5
GO Category Molecular Function
GO Term protein binding
6
GO Category Biological Process
GO Term anatomical structure morphogenesis
7
GO Category Biological Process
GO Term cell differentiation
8
GO Category Biological Process
GO Term multicellular organismal development
9
GO Category Biological Process
GO Term biosynthetic process
10
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
Presence of Splice variants No