LOC_Os08g39140

Expression Profile

RGAP LOCUS ID LOC_Os08g39140
RAP-DB ID Os08g0500700
Function heat shock protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8

2) CELLO Prediction
localization Cytoplasmic
score 3.577

3) NUCPRED Prediction
localization Non Nuclear
score 0.55

4) Y-Loc Prediction
localization Cytoplasm
score 94
confidence value 0.63
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) hsp82A
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 3
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.152
NLS score 0.96
Protein Sequence >LOC_Os08g39140.1 protein
MASETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPELFIHIVPDKASNTLSIIDSGIGMTKSDLVNNLGTIAR
SGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKITLYLKDDQLEYLEERRLKDLIKKHS
EFISYPISLWTEKTTEKEISDDEDEEEKKDAEEGKVEDVDEEKEEKEKKKKKIKEVSHEWSLVNKQKPIWMRKPEEITKEEYAAFYKSLTNDWEEHLAVK
HFSVEGQLEFKAVLFVPKRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEWLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEI
AENKEDYNKFYEAFSKNLKLGIHEDSTNRNKIAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMVDAIDE
YAVGQLKEFEGKKLVSATKEGLKLDESEDEKKRKEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMKAQALRDSSMAGY
MSSKKTMEINPENAIMEELRKRADADKNDKSVKDLVLLLFETALLTSGFSLDDPNTFGSRIHRMLKLGLSIDEDETAEADTDMPPLEDDAGESKMEEVD

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Biological Process
GO Term response to abiotic stimulus
3
GO Category Molecular Function
GO Term nucleotide binding
4
GO Category Biological Process
GO Term cellular process
5
GO Category Molecular Function
GO Term protein binding
6
GO Category Cellular comBiological Processonent
GO Term cytosol
7
GO Category Cellular comBiological Processonent
GO Term mitochondrion
8
GO Category Molecular Function
GO Term hydrolase activity
9
GO Category Biological Process
GO Term protein metabolic process
10
GO Category Cellular comBiological Processonent
GO Term nucleus
11
GO Category Cellular comBiological Processonent
GO Term cellular_component
12
GO Category Biological Process
GO Term response to biotic stimulus
13
GO Category Biological Process
GO Term flower development
14
GO Category Cellular comBiological Processonent
GO Term cell wall
15
GO Category Biological Process
GO Term post-embryonic development
16
GO Category Biological Process
GO Term catabolic process
17
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
18
GO Category Biological Process
GO Term metabolic process
19
GO Category Biological Process
GO Term multicellular organismal development
Presence of Splice variants YES