LOC_Os08g36910

Expression Profile

RGAP LOCUS ID LOC_Os08g36910
RAP-DB ID Os08g0473900
Function alpha-amylase precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 4

2) CELLO Prediction
localization Extracellular
score 2.204

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.81
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category 0

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) alphaAmy3|OsAmy3D|RAmy3D
Function assigned as per literature
Subcellular localization as per literature Plastids
Cells used for localization experiment rice protoplast cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 15235120
Reference of localization http://www.plantphysiol.org/content/135/3/1367.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.095
NLS score -0.47
Protein Sequence >LOC_Os08g36910.1 protein
MPPDVEVIRHEHIDHPSSTRDRSVVVSSNSLSNTVSAYTDMKNTSSLCLLLLVVLCSLTCNSGQAQVLFQGFNWESWKQQGGWYNMLKGQVDDIAKAGVT
HVWLPPPSHSVAPQGYMPGRLYDLDASKYGTAAELKSLIAAFHGKGVQCVADVVINHRCAEKKDARGVYCVFEGGTPDDRLDWGPGMICSDDTQYSDGTG
HRDTGEGFGAAPDIDHLNPRVQRELTDWLNWLKSDVGFDGWRLDFAKGYSTDIAKMYVESCKPGFVVAEIWNSLSYNGDGKPAANQDQGRQELVNWVNAV
GGPAMTFDFTTKGLLQAGVQGELWRLRDGNGKAAGMIGWLPEKAVTFVDNHDTGSTQKLWPFPSDKVMQGYAYILTHPGVPCIFYDHMFDWNLKQEITAL
AAIRERNGINAGSKLRIVVADADAYVAVVDEKVMVKIGTRYDVGNAVPSDFHQTVHGKDYSVWEKGSLRVPAGRHL

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term extracellular region
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Molecular Function
GO Term hydrolase activity
4
GO Category Biological Process
GO Term response to endogenous stimulus
Presence of Splice variants No