LOC_Os08g32130

Expression Profile

RGAP LOCUS ID LOC_Os08g32130
RAP-DB ID Os08g0416900
Function heat shock protein DnaJ, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization PlasmaMembrane
score 3.512

3) NUCPRED Prediction
localization Non Nuclear
score 0.22

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.03
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsV5B
Function assigned as per literature OsV5B functions as chaperone proteins of protochlorophyllide oxidoreductase (POR), which catalyzes a light-dependent reaction in the chlorophyll biosynthesis pathway
Subcellular localization as per literature Chloroplasts
Cells used for localization experiment  N. benthamianaleaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 27565208
Reference of localization https://academic.oup.com/pcp/article/57/11/2392/2445853
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.112
NLS score -0.29
Protein Sequence >LOC_Os08g32130.2 protein
MQQAAVAFGQAAFLARPLRRPPHRLYVRAGWAEAGGVAAGRGRASLPRPRLSASLSIGAGGYGDEHAPLFPRQQAWDPYKILGVDHDASEEEIRSARNFL
LKQYAGHEETEEAIEGAYEKIIMKSYSHRKKSKINLKSKIQKQVEESPSWFKAMLGFFEVPSAEIISRRLALFAFIAGWSIVTSAETGPTFQLALSLVSC
IYFLNEKMKNLSRASMTGFGVFVGGWIVGSLLVPVIPTFAIPPTWSIELLSSLVAYVFLFLGCTFLK

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term plastid
2
GO Category Biological Process
GO Term cell death
3
GO Category Cellular comBiological Processonent
GO Term mitochondrion
Presence of Splice variants YES