LOC_Os08g31580

Expression Profile

RGAP LOCUS ID LOC_Os08g31580
RAP-DB ID Os08g0408500
Function ethylene-responsive transcription factor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 7.5

2) CELLO Prediction
localization Nuclear
score 2.605

3) NUCPRED Prediction
localization Non Nuclear
score 0.32

4) Y-Loc Prediction
localization Nuclear
score 71.96
confidence value 0.17
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category AP2-EREBP/ERF

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsERF48|OsDRAP1
Function assigned as per literature OsERF48 regulates OsCML16, a calmodulin‐like protein gene that enhances root growth and drought tolerance
Subcellular localization as per literature Nucleus
Cells used for localization experiment rice protoplast
NUCLEAR or Not Nuclear NUCLEAR
PMID 28244201
Reference of localization https://onlinelibrary.wiley.com/doi/abs/10.1111/pbi.12716
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.093
NLS score -0.47
Protein Sequence >LOC_Os08g31580.1 protein
MAAAIEGNLMRALGEAPSPQMQKIAPPPFHPGLPPAPANFSSAGVHGFHYMGPAQLSPAQIQRVQAQLHMQRQAQSGLGPRAQPMKPASAAAPAAAAARA
QKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALTYDQAAYRLRGDAARLNFPDNAASRGPLDAAVDAKLQAICDTIAASKNASSRSRGGAGR
AMPINAPLVAAASSSSGSDHSGGGDDGGSETSSSSAAASPLAEMEQLDFSEVPWDEAEGFALTKYPSYEIDWDSLLNNNN

GO Analysis
1
GO Category Biological Process
GO Term signal transduction
2
GO Category Biological Process
GO Term response to abiotic stimulus
3
GO Category Molecular Function
GO Term DNA binding
4
GO Category Biological Process
GO Term response to endogenous stimulus
5
GO Category Biological Process
GO Term response to stress
6
GO Category Biological Process
GO Term biosynthetic process
7
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
8
GO Category Molecular Function
GO Term protein binding
9
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
10
GO Category Cellular comBiological Processonent
GO Term nucleus
11
GO Category Biological Process
GO Term cellular process
12
GO Category Biological Process
GO Term cell differentiation
Presence of Splice variants No