LOC_Os08g31560

Expression Profile

RGAP LOCUS ID LOC_Os08g31560
RAP-DB ID Os08g0408200
Function WD-40 repeat family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 6

2) CELLO Prediction
localization Nuclear
score 2.326

3) NUCPRED Prediction
localization Non Nuclear
score 0.12

4) Y-Loc Prediction
localization Nuclear
score 92.9
confidence value 0.8
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) SRWD4
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.092
NLS score -0.47
Protein Sequence >LOC_Os08g31560.1 protein
MDEFELEDNLELLLQSIQELIEDQGENNPFGAANHDELIASLLHNNQENPLTDVSVEDVRDGKDMQGIPWEKIVFRRDQYREMKMKNYRNYQNLSYAREE
ALKDCKKVEKDSPYYDFQYNTRRARPSIVHFQLRNLVWATTKHDVYTVHNQSVTHWSSLDQTSTELINADDCIIPKQRGHGSQSVAMVQVTTMAVDDSLL
VIGGFQGELICKRLEDDGVLFSTRVTDDENAITNSLEIYQDPTGSRRLVAANNDCSVRIFDIEYFDLLKHYVFPWSVNSVSVSPKGGLFAVLGDHEDGLV
VDPKCGKAIGALKGHLDYSFASAWHPDGNILATGSQDTTCRLWDIRNLSESVAVLGGRMGSIRCIKFSSDGRFLATAEPVDFVHIYDSYADYGRSHEIDL
FGEIAGLSFSPDAEALYVGIADPTYGGLIEFNRRHQHHYLNCMW

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term intracellular
2
GO Category Molecular Function
GO Term molecular_function
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No