LOC_Os08g31470

Expression Profile

RGAP LOCUS ID LOC_Os08g31470
RAP-DB ID Os08g0407200
Function peptidase, trypsin-like serine and cysteine proteases, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 11

2) CELLO Prediction
localization Cytoplasmic
score 1.327

3) NUCPRED Prediction
localization Non Nuclear
score 0.09

4) Y-Loc Prediction
localization Cytoplasm
score 64
confidence value 0.14
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) PAY1
Function assigned as per literature PAY1 affects plant architecture and grain yield in rice
Subcellular localization as per literature Nucleus
Cells used for localization experiment tobacco epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 26095647
Reference of localization https://onlinelibrary.wiley.com/doi/full/10.1111/tpj.12905
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.085
NLS score -0.04
Protein Sequence >LOC_Os08g31470.1 protein
MWPSDIWKAHAGSSQSEGSALDMERNGCNHNCCPSPLQPIASGGQHSESSAAYFSWPTSTLMHGSAEGRANYFGNLQKGVLPGHLGRLPTGQRATTLLDL
MIIRAFHSKILRRFSLGTAIGFRIKKGTLTDTPAILVFVARKVHRKWLSPTQCLPAHLEGPGGVWCDVDVVEFSYYGAPAPTPKEQLYDELVDGLRGSDP
SIGSGSQVASLETYGTLGAIVKSRTGNKQVGFLTNRHVAVDLDYPNQKMFHPLPPNLGPGVYLGAVERATSFITDDVWYGIYAGTNPETFVRADGAFIPF
ADDYDITSVNTSVKGVGVIGDVKAIDLQSPISSLIGRQVVKVGRSSGLTTGTVVAYALEYNDEKGICFFTDFLVVGENQQTFDLEGDSGSLIILTGKDGE
KPQPIGIIWGGTANRGRLKLKSGQGPENWTSGVDLGRLLDLLELDLITTSEGLQEALEEQRIILAAAAAAANSTAGESSPVAGPQENEKVDKIYEPLGIN
IQQLPRDNSATSTGPDEFHVDTVEGVTNVEERQFLIGMSPAREGQEANGDLNNLAELENSPEDICFSLHLGEREPKRLRSDSSLDIDLQK

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Molecular Function
GO Term catalytic activity
4
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES