LOC_Os08g28710

Expression Profile

RGAP LOCUS ID LOC_Os08g28710
RAP-DB ID Os08g0374600
Function receptor protein kinase CRINKLY4 precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 7

2) CELLO Prediction
localization Cytoplasmic
score 1.011

3) NUCPRED Prediction
localization Non Nuclear
score 0.3

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.22
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsRLCK253
Function assigned as per literature OsRLCK253 confers  abiotic stress tolerance.
Subcellular localization as per literature Nuclear membrane
Cells used for localization experiment onion epidermal cells.
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 21534973
Reference of localization https://nph.onlinelibrary.wiley.com/doi/epdf/10.1111/j.1469-8137.2011.03740.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.107
NLS score 0.21
Protein Sequence >LOC_Os08g28710.1 protein
MWGELGNAATVAQLVGADLGGLISKIIQAAATARRNKAECEQLAVRASMIYDLLPHLQHPEVVRRPEVLRPLALLEDTLREAHQLVTCCQHKGPTYRFVM
AGRLADKIRSVQARIDSYLLFLPLISHIDIIHCLDQIHRMLISTGDGDCRTMASPSADSQSLLQRRLVLHGDGECEKFTMPQLAMATNNFAVDRQIGEGR
SFGMMMYKGRLPDRREVAIRRASPRRKGDFLRELAILSPLRHDHIVRLLGCCVAAATTTSSAEDEDCLLVYEYIDNGTLYDHLHGSDGASSLVTTSWKTR
IEILVGVSRAIEHLHSHAVPPVIHRDVKLSNILLDSSYAPRLSDFGLAVSCDEVECTAEMPILGTFEYMDPEYLSTGNLTPASDVYSFGVVMLELLTGKK
AIHDEKHGAVVATSLVASVLPNMEAGDLMKELDRGPGLKPTPRQLKATEVVARTAVRCVHSQGKERPPMTEVVANLQEALDLLSLDE

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term kinase activity
4
GO Category Biological Process
GO Term protein modification process
5
GO Category Molecular Function
GO Term protein binding
Presence of Splice variants No