LOC_Os08g23320

Expression Profile

RGAP LOCUS ID LOC_Os08g23320
RAP-DB ID Os08g0322600
Function para-hydroxybenzoate--polyprenyltransferase, mitochondrial precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization PlasmaMembrane
score 4.194

3) NUCPRED Prediction
localization Non Nuclear
score 0.45

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.98
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPPT1
Function assigned as per literature OsPPT1 is involved in ubiquinone biosynthesis in rice
Subcellular localization as per literature Mitochondria ( N-terminal peptide of OsPPT1a was used)
Cells used for localization experiment Onion peel and tobacco leaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 16501255
Reference of localization https://academic.oup.com/pcp/article/47/5/581/1844149
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 3
Number of PAT7 2
Number of Bipartite 0
Basic residues % 0.086
NLS score 0.91
Protein Sequence >LOC_Os08g23320.1 protein
MALLRAAAAADLLRRHRRAPLPLLLSALSPPPPTTPESCPDGPSPVAPYFAPPPPPLCRRRRSWPPPPPPPRVSSSSYVGRGILLPATFSIYSPLSTSSS
ASPDGSPDEDSSPPHPSPAAAPPSSWVDRWLPQAARPYAMLARLDKPIGTWLLAWPCFWSISMAAMPGELPDMRMLALFGCGAVLLRGAGCTVNDLLDRD
IDNKVERTKSRPFASGILTPTQGVGFLGLQLLLGLGILLQLNNYSRILGASSLFLVFSYPLMKRFTFWPQAYLGLTFNWGALLGWAAIKESLDPAIILPL
YTAGICWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDLTKHWISGFGVACIGSLALSGYSADLAWPYYPFLAAASAQLAWQISTVDLSDRLDCNRKFVSN
KWFGALIFGGVLCGRLVS

GO Analysis
1
GO Category Molecular Function
GO Term transferase activity
2
GO Category Biological Process
GO Term embryo development
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No