LOC_Os08g15080

Expression Profile

RGAP LOCUS ID LOC_Os08g15080
RAP-DB ID Os08g0249400
Function proline rich protein 3, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 5

2) CELLO Prediction
localization Nuclear
score 2.087

3) NUCPRED Prediction
localization Non Nuclear
score 0.08

4) Y-Loc Prediction
localization Nuclear
score 44.7
confidence value 0.04
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Gm8
Function assigned as per literature
Subcellular localization as per literature Nuclear and cytoplasm
Cells used for localization experiment Tobacco leaf epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 30209741
Reference of localization RSNP-DB
Is Subcellular localization evidence by author available ? Yes
Image

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.081
NLS score -0.13
Protein Sequence >LOC_Os08g15080.1 protein
MAGTIHPFHQQWPPAAGAPAPAAAVPPPPPVPGVPGAPDAAAAAAAAAAAAAAAAARPDEVRTIFITGLPTDVKERELHNLLRWLPGFEASQINFKGDQP
MGFALFSSAHHAIAAKAALQDLIFDAETKTALHTEMAKKNLFVKRGVGNDANAMDQSKRLRTGGDYTHSPYAAPPYHPPPPAVSMWGTPGYIAAPPPYNH
YAAYSVPPVAMTSPSPVPGPTAYAPVQNTKDNPPCNTLFIGNLGETVIEEELRSLFSVQPGYKQMKVLRQDRNTVCFIEFEDVNAASAVHHNLQGAVIPS
SGRGGMRIQFSKNPYGRRKDSVGGIGGSLNGAPSN

GO Analysis
1
GO Category Molecular Function
GO Term RNA binding
2
GO Category Molecular Function
GO Term nucleotide binding
3
GO Category Molecular Function
GO Term nucleic acid binding
Presence of Splice variants No