LOC_Os08g12430

Expression Profile

RGAP LOCUS ID LOC_Os08g12430
RAP-DB ID Os08g0220600
Function VERNALIZATION-INSENSITIVE, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 14

2) CELLO Prediction
localization Nuclear
score 3.352

3) NUCPRED Prediction
localization Non Nuclear
score 0.49

4) Y-Loc Prediction
localization Nuclear
score 92.97
confidence value 0.9
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsVIL1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 1
Basic residues % 0.125
NLS score 0.45
Protein Sequence >LOC_Os08g12430.1 protein
MDPGKHNGMSLKDRRELVYEVSQWPQGASEILQCWTRRDLLELICAELGKERKYTNVPKSKMIAYLLKLVLRKNGQPKDDNANASILGQNNKDDTEKKEN
EEQPHHFSRSAKSDSSMCREAQAGSTAVCRNVACQATLNSGDAYCKRCSCCICHKYDENKDPSLWLVCSSDTPYSGYSCGTSCHLKCALKNKKAGIFKNG
CNKKSDGSFYCVWCGKMNWLMRNLRKQLAIARESRRVDVLCERLSLTHKMVKGSERYRELANIINSAVKILEKEVGCALDQVSAITGRGIVNRLCCGADV
QKLCSCALEMVDSTLSSTLDFETNNNLEAPGPQPQVFFVEITPFSVLVVLKYQDNIAEEIDGCKVWHRSANMANYPAEPTCHVLRPNTRSLFSGLSPSTE
YFFKVLPFGCSQGYGEWEVKCSTRSLNHGSSQCSTQNSESMSIKEDLEQHQKNELNLKNKQWWGIQYDSPSANSNENDVCPDLHPKRAKLAKLDGASDND
ESQLLPTSEVLPFMSSNSSLSEVPSKPDWVSSTPDSACKNHVERQYEYSVKVIRWLEHEGHMDKDFRVKFLTWFSLKASAQERRIVNAFVDALVSDPASL
VAQLIDSFMEVVCSKEKPAQPNGGCCNLWH

GO Analysis
1
GO Category Biological Process
GO Term reproduction
2
GO Category Biological Process
GO Term response to abiotic stimulus
3
GO Category Biological Process
GO Term post-embryonic development
4
GO Category Cellular comBiological Processonent
GO Term nucleus
5
GO Category Cellular comBiological Processonent
GO Term cellular_component
6
GO Category Molecular Function
GO Term protein binding
Presence of Splice variants No