LOC_Os08g10630

Expression Profile

RGAP LOCUS ID LOC_Os08g10630
RAP-DB ID Os08g0207500
Function metal cation transporter, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 11

2) CELLO Prediction
localization PlasmaMembrane
score 1.75

3) NUCPRED Prediction
localization Non Nuclear
score 0.03

4) Y-Loc Prediction
localization Chloroplast
score 4
confidence value 0.13
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsZIP4
Function assigned as per literature OsZIP4 is a Zn transporter that may be responsible for the translocation of Zn within rice plants
Subcellular localization as per literature plasma membrane
Cells used for localization experiment onion epidermal cells.
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 16263903
Reference of localization https://www.jstor.org/stable/pdf/24035819.pdf
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.061
NLS score -0.22
Protein Sequence >LOC_Os08g10630.1 protein
MDAMRQSTPRAMLLLCAVLMLAVAPPGAATAAAVAGCECGNAAAAAVAGEDARGALRLKLVAIASILAAGAAGVLVPVLGRSFAALRPDGDVFFAVKAFA
AGVILATGMVHILPAAFDALASPCGGGRGGGGGFPFAGLVAMAAAMATMMIDSVAAGYYRRSHFKKPRPVDDPADAARAAGVEEGGAEHAGHVHVHTHAT
HGHAHGHVHSHGHGHGHSHGSAPAAATSPEDASVAETIRHRVVSQVLELGILVHSVIIGVSLGASLRPSSIRPLVGALSFHQFFEGIGLGGCIVQANFKA
KATVIMATFFSLTAPVGIALGIAISSSYSKHSSTALVVEGVFNSAAAGILIYMSLVDLLAADFNNPKLQTNTKLQLAVYLALFLGAGMMSLLAIWA

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Biological Process
GO Term biological_process
4
GO Category Biological Process
GO Term transport
5
GO Category Molecular Function
GO Term transporter activity
6
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No