LOC_Os08g10480

Expression Profile

RGAP LOCUS ID LOC_Os08g10480
RAP-DB ID Os08g0205400
Function heavy metal-associated domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 14

2) CELLO Prediction
localization Nuclear
score 1.813

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Cytoplasm
score 94
confidence value 0.71
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsATX1
Function assigned as per literature OsATX1 plays an important role in facilitating root-to-shoot Cu translocation and the redistribution of Cu from old leaves to developing tissues and seeds in rice
Subcellular localization as per literature cytoplasm and Nucleus
Cells used for localization experiment rice mesophyll protoplasts 
NUCLEAR or Not Nuclear NUCLEAR
PMID 30002257
Reference of localization http://www.plantphysiol.org/content/178/1/329
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.127
NLS score -0.47
Protein Sequence >LOC_Os08g10480.1 protein MSCEGCVGAVKRVLGKMQGVESFDVDIKEQKVTVKGNVTPDAVLQTVSKTGKKTSFWDAEPAPVEATAASS

GO Analysis
1
GO Category Molecular Function
GO Term binding
2
GO Category Cellular comBiological Processonent
GO Term intracellular
3
GO Category Biological Process
GO Term transport
Presence of Splice variants No