LOC_Os08g10440

Expression Profile

RGAP LOCUS ID LOC_Os08g10440
RAP-DB ID Os08g0205150
Function NBS-LRR disease resistance protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 3

2) CELLO Prediction
localization Nuclear
score 2.179

3) NUCPRED Prediction
localization Non Nuclear
score 0.54

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.14
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPi304
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.119
NLS score -0.16
Protein Sequence >LOC_Os08g10440.1 protein
MASGMVVSASMGVMKPLLTKLTVLMGDEYKKLKGVRKQVSFLKDELTTMSAFLEKLAFMDDDGGELDPLVKDWRNHVREMTYDIEDCIDDFMHQLGGGAD
ASGFLQKTARRLKTLRVRHQIANQIDEIKARVIEANQRRRRYELDGCSNSRASESVAIDPRLTALYQKADNLVGIDGPTEELIQLLTDAGQQKLMVVSIV
GFGGLGKTTLAKQVYDKIGQQFDCKAFVSVSQRPDIARLLRTIQSKFNIQESSQAREVQDIIDDIRYYLGNKRYLIVVDDLWKQEAWNIIHCAFPENSNG
SRVIVTTRVEDVACWACSNHRYIYKMKALDSDDSKKLFFNRVFGFEDGCPSQYEKVSAEILKKCGGLPLAIITIASLLACRPARIMQEWERIRNSLGTPF
GTNPSLEGMRQILNLSYKNLPLHLRTCLLYLGNYPEDYKIGRNDVVRQWIAEGFVRSSPGQDLEDVGQSYFNELVNRGLIQPEQNYDREVTGCRVHDMML
DLILSKCKEDNFISVAYSGEDYLSIARQHGYSSNKVRRLSLQFKAAESDCTVLIEGKATPAHLAQVRSISLFEKSTSGLPLLLRFKYLRVLHIMLGHGCE
RADLTAVSKLLQLRCLIFLDYGCKVELPSRICDLVHLETLDIACNVITSIPLDIVSLPCLSDLRLPGGVQLNCLPNSKSLRTLVICPPLDMDFFKALGEQ
TNLRDLRLYFDGKESSTASNLDSLGSSVGKLQNLRNLKIYFQFGISGDSLMGSLSRFPRSIEILDMQTCCLSRVPRWINVALVNLRRLHLYVSEASTDEV
SILGELPSLVFLDLNLRLKSKGTIMFGGGEGSFPALEDLLLRCVGDVASHSRLCFLAGVMPKLQRLVLRFWICELGIDTAPVGMEHLSSLQLIFVDIYVL
QEKINVFPRDAVEHVFRQAAQAHPNQPAFEFHCSG

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Molecular Function
GO Term nucleotide binding
3
GO Category Biological Process
GO Term response to stress
Presence of Splice variants No