LOC_Os08g07890

Expression Profile

RGAP LOCUS ID LOC_Os08g07890
RAP-DB ID Os08g0176200
Function NB-ARC domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 7

2) CELLO Prediction
localization Nuclear
score 1.699

3) NUCPRED Prediction
localization Non Nuclear
score 0.48

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.13
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) ORK1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 5
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.121
NLS score 1.06
Protein Sequence >LOC_Os08g07890.1 protein
MAMMLVRVSTRVMNTVLSKLSKMLEDKYTKLKGVHSQIAFFRDELSSMKAALEMLESVEELDPLHKDWRDTVRELAYDIEDFIDSFLVLVDHKQDEQSTF
FKGFSYKLKKMKACHEISNEIEELKTRVIEASKRHKRYNFIGLVASCTTSDIDPRLPALYVEVDELVGINGPKEHIMEWFAKGIRDVKVKVLSIVGSGGL
GITDYTSEDERQLIDRIRDRLKDKRYFVVIDDVWDVEAWKVVSLALFNNRCGSRIVMTTRNAAVASHCSSDGGCVYQMEPLNFADSKMLFCQKAFRSREL
YNPHLEKVCDEILAKCGGLPLAIITVSSLLAGKHAKDEWDRMLNDIGCALANNPDAGNMTKILSLSYFELPHHLRTCFLYLCIFPEDYKVNKQRLINRWI
AEGFVHEKQGWSTYEVGQNYFNDLINRSLIQPVDLKYGQAKACRVHDIILDFITCKATKENFVTTLDFAEHGHISKFRVRRLCAKNHNEEKVNKSASLNL
SHVRSLTIFQHVNGTSLFVFPTLRVLDLSKSGLTENHLESIDKLHHLKYLSLRSTSITKLPTKIEQLHYLQTLDICDTKIQELPLSIAKLECLAHLYVER
WTRFPDGLIGKMQSLEELEEFGIYCELGKSLEGFSQLTKLRTLKVHLFWWSDAEECQNYVSALLSSNLHHLYLTGGPLTLESWYPPTPCIIRKLHIKGCY
NRKVPNWMSYLGSLTELQLWIRRMGPNDVKILGAIPSLHFLEVRTLCGTNGRIIICGNQGFRSLRYFSLRIKRCGTMLEFEAGSMPKLEHLQLEFRLHGM
DCLNGASDFGIQNLSTLTKVEIGIWGNIYSDGIYDPAQDMDDSITRSVVSLIKATIETLPNCPTSRFQLEYDCGNCLLGETSQEFEGQGPDEAYPHEHKI
FSLQELQDATDFFSNNNVLVDLFDSKLYKGRLQDGSLVVVHMDCPTADWSRRTRQFQTQVEMPVHRNLYEDIEHLLSGCYSTERPPSQAPLDWQTRLRIA
LGSARGLSYLHDHCDPKIIHRDIRAVNIFLNEDFEALVGNFCLAKLEDDMDTDDRTAVRGVVGHIAPEYLSAGILSEKTDVYGYGIMLLELITGKRALYH
DGRARDEDIFLLDWVKRLLKEKKLKMLVDPDLRNNYIHVEVKSLIKVALICTQVSPVKRPKMVEVVRMLEGGDGLAQRWEVWWKIEVVRQEVPLTSSFSL
SAPNSFANNTSLCGLGTPSAPPLHPPPPYNPGDSFRFTAMQQPLFPPVRCGTYAGRSSRTGAISGGVAAGAALLFNIPAIGFAWWRRRKPQEYFPVVPGV
HLGQLKRFSLRELQVATKTFNNKNILGTGGFSKVYKGRLADGSLVAVKRLKEQRTPGGELQFQTEVEMISMALHRNLLRLRGFCMTPTERLLVYPYMANG
SVASRLRERPPSEPPLDWQTRRRIAAGSARGLSYLHDHCNPKIIHRDVKAANILLDEDFEAVFGDFGLAKPMDYKDTHVTTAVHGTIGHIAPEYLSTGIL
SEKTDVFGYGIMLLELITGKRAFDLALLARGEGVMPLDWVKRLIKEEKLEKLIDPDLQNKYIDAEVESLIQVALLCTQGSPLERPKMAAVVRMLDEGDGL
AERWKEWQKIEIVQQDVELGLYQNGWTVDSTENLHAVELSGPRWIGQFGPVMAVFFLGRLYVYLRLTLLGTLSTLGGRTGIDIVQR

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term receptor binding
4
GO Category Molecular Function
GO Term kinase activity
5
GO Category Biological Process
GO Term protein modification process
6
GO Category Biological Process
GO Term multicellular organismal development
7
GO Category Cellular comBiological Processonent
GO Term plasma membrane
8
GO Category Biological Process
GO Term cell cycle
Presence of Splice variants No