LOC_Os08g07840

Expression Profile

RGAP LOCUS ID LOC_Os08g07840
RAP-DB ID Os08g0175300
Function PolI-like DNA polymerase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization mito
score 10

2) CELLO Prediction
localization Cytoplasmic
score 1.293

3) NUCPRED Prediction
localization Non Nuclear
score 0.36

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.67
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPOLP1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.145
NLS score -0.13
Protein Sequence >LOC_Os08g07840.1 protein
MAVAPPLPPAPARQLRRWKGSSPRPPPWLSSPFRRTRYLSRPAFAAGGRQDYSPSSGMGVSKTGAFRLGLYGNLNVQSSVQEWVDETKRLFFLRTTNSVR
NNITNGTTPLRVGNLRHDPSEDIRSSNYPSLYNQRERGPSNSIVNRHVDTDLAKHRVMYQSAHAVPAPFSVVNNDIKPLNMLDGSKEEIPWHDSVTMESS
LPKVSKSEKTLVVDKAIPDKKEHKRITRKVTPNFPDKASLSTESKNARKLLATIYDKVLVVDNVESARSVVKLLTTKYKGFIHACDTEVANIDVKEETPV
GHGEVICFSICSGNSDGEADFGNGKTCIWVDVLDGGRDVLMEFAPFFEDPFIKKVWHNYSFDIHVIENCGIKVAGFHADTMHLARLWDSSRRTDGGYSLE
GLTNDYRVMDAVLKDIPKTGKVSMKTIFGRKKVRKDGSEGKTISIEPVEKLQREDRELWICYSSLDSMSTLKLYESLKNKLEAKEWIFDDCPRGTMYDFY
EEYWRPFGALLVKMETEGVLVDRAYLSEIEKAAVTERELAADKFRKWASKHCPDAKYMNVNSDNQIRQLFFGGIENRNKRGETWPQSKTFKVPNDEGIAT
EGKKTPKSRTIKLFTIVEDLKIDMFTPTGWPSVSGDVLRSLAGKIPTDHIYKIDDGQEFDEDGSSLELPEQDIEDTSPYGTAYEAFGGGKKGREACHAIA
ALCEVFSIDKLISGFIVPLQGDRISCKEGRIHCSLNINTETGRLSARTPNLQNQPALEKDRYKIRHAFVAAPGNTLIVADYGQLELRILAHLTNCKSMLE
AFKAGGDFHSRTAMNMYQHVRDAVEEKKVLLEWHPQPGQDKPPVPLLKDAFGAERRKAKMLNFSIAYGKTAVGLSWDWKVSVREARDTLKLWYRDRKEVS
AWQKKQKAFALEKCEVYTLLGRSRQFPNMTHAGPGQKGHVERAAINAPVQGSAADVAMCAMLEIERNARLKELGWRLLLQVHDEVILEGPTESAEEAKTI
VVECMSKPFYGTNILKVDLAVDAKYAKSWYAAK

GO Analysis
1
GO Category Molecular Function
GO Term DNA binding
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term DNA metabolic process
5
GO Category Molecular Function
GO Term transferase activity
6
GO Category Biological Process
GO Term cellular component organization
7
GO Category Cellular comBiological Processonent
GO Term mitochondrion
8
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No