LOC_Os08g07060

Expression Profile

RGAP LOCUS ID LOC_Os08g07060
RAP-DB ID Os08g0167500
Function CRR6, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization chlo
score 9

2) CELLO Prediction

localization Cytoplasmic
score 1.485

3) NUCPRED Prediction

localization Non Nuclear
score 0.11

4) Y-Loc Prediction

localization Chloroplast
score 9
confidence value 0.41
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020) CRR6
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis

Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.107
NLS score -0.47
Protein Sequence >LOC_Os08g07060.1 protein
MAATALQLPVASSQRLTLRRFPGSGSLGRYSGLRWPVAAQARRAAEEGFRLRVAFNPSGNFDLSLSTDQDDAPQVEPPPPPTEGRFEIVINTDIIRTLDL
SPVHEVLGDLNSLTPAQTRNLLDRTVGFTINYEREDPYDVRELSEFPDIRLWFVRLDACYPWFPVVLDWRAGELARYAAMLAPHQMSMRLGVVFNPEALE
LFVMKKVFIVYSWLKQQEHPKPGLKTADMARMLGFGIGDELFDLIEKYPAGPS

GO Analysis

1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term membrane
3
GO Category Cellular comBiological Processonent
GO Term plastid
4
GO Category Cellular comBiological Processonent
GO Term thylakoid
5
GO Category Biological Process
GO Term cellular component organization
6
GO Category Biological Process
GO Term cellular process
Presence of Splice variants No