| RGAP LOCUS ID |
LOC_Os08g06550 |
| RAP-DB ID |
Os08g0162800 |
| Function |
acyl CoA binding protein, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
mito |
| score |
8 |
2) CELLO
Prediction
|
| localization |
Cytoplasmic |
| score |
1.985 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.03 |
4) Y-Loc
Prediction
|
| localization |
Cytoplasm |
| score |
99 |
| confidence value |
0.96 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
RPP10|OsACBP1 |
| Function assigned as per literature |
OsACBPs are involved in stress responses |
| Subcellular localization as per literature |
cytosol |
| Cells used for localization experiment |
Transgenic Arabidopsis |
| NUCLEAR or Not Nuclear |
NOT NUCLEAR |
| PMID |
24926784 |
| Reference of localization |
https://www.tandfonline.com/doi/full/10.4161/psb.29544 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.143 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os08g06550.1 protein
MGLQEDFEQYAEKAKTLPESTSNENKLILYGLYKQATVGDVNTARPGIFAQRDRAKWDAWKAVEGKSKEEAMSDYITKVKQLLEEAAAAAS |
GO Analysis |
| 1 |
| GO Category |
Molecular Function |
| GO Term |
lipid binding |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
response to abiotic stimulus |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
transport |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
response to stress |
|
| 5 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytosol |
|
| 6 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
plasma membrane |
|
| Presence of Splice variants |
No |
