LOC_Os08g04310

Expression Profile

RGAP LOCUS ID LOC_Os08g04310
RAP-DB ID Os08g0137400
Function plastocyanin-like domain containing protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization vacu
score 7

2) CELLO Prediction
localization PlasmaMembrane
score 1.373

3) NUCPRED Prediction
localization Non Nuclear
score 0.04

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.71
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsUCL23
Function assigned as per literature OsUCL23 regulates the deposition of the pollen intine by interacting with a proton-dependent oligopeptide transport (POT) transporter in prevacuolar compartment (PVC)/multivesicular bodies (MVBs)
Subcellular localization as per literature Prevacuolar Compartments and Multivesicular Bodies
Cells used for localization experiment Rice protoplast
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 31871204
Reference of localization https://www.pnas.org/content/117/1/727.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.069
NLS score -0.47
Protein Sequence >LOC_Os08g04310.1 protein
MEWARGPAMAAAAAAAVVMVAAVLAGQAMAAGATTYTVGAPDGLWDMETDYKEWVARRTFHPGDKLTFTYSRELHDVVEVTKAGYDACSNANNISAFRSG
NDLVALTAVGTRYFLCGLTGHCGSGMKIRIDVVAAASSGPAAAAAPLPSTSSVTAAVAGSRLVLVLLYALLPLW

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Molecular Function
GO Term binding
3
GO Category Cellular comBiological Processonent
GO Term membrane
Presence of Splice variants No