LOC_Os07g49400

Expression Profile

RGAP LOCUS ID LOC_Os07g49400
RAP-DB ID Os07g0694700
Function OsAPx2 - Cytosolic Ascorbate Peroxidase encoding gene 4,5,6,8, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 4

2) CELLO Prediction
localization Cytoplasmic
score 2.011

3) NUCPRED Prediction
localization Non Nuclear
score 0.08

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.35
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsAPX2|APXb
Function assigned as per literature APX2 is involved in H2O2 homeostasis, chloroplast protection, plant architecture and fertility maintenance
Subcellular localization as per literature Cytosoll and formed a concentration sphere around chloroplasts
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 29549445
Reference of localization https://link.springer.com/article/10.1007%2Fs00299-018-2272-y
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.1
NLS score -0.47
Protein Sequence >LOC_Os07g49400.2 protein
MGSKSYPTVSDEYLAAVGKAKRKLRGLIAEKNCAPLMLRLAWHSAGTFDVSSRTGGPFGTMKNPGEQSHAANAGLDIAVRLLDPIKDQLPILSYADFYQL
AGVVAVEVTGGPEVPFHPGRQDKPEPPPEGRLPDATQGSDHLRQVFSAQMGLSDKDIVALSGGHTLGRCHKERSGFEGAWTSNPLIFDNSYFTELVSGEK
EGLLQLPSDKALMADPAFRPLVEKYAADEDAFFADYAEAHLKLSELGFAEE

GO Analysis
1
GO Category Molecular Function
GO Term catalytic activity
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term response to stress
5
GO Category Biological Process
GO Term response to abiotic stimulus
6
GO Category Biological Process
GO Term biological_process
7
GO Category Cellular comBiological Processonent
GO Term cell wall
8
GO Category Molecular Function
GO Term protein binding
9
GO Category Cellular comBiological Processonent
GO Term cytosol
10
GO Category Biological Process
GO Term catabolic process
11
GO Category Biological Process
GO Term cellular process
12
GO Category Cellular comBiological Processonent
GO Term plasma membrane
13
GO Category Biological Process
GO Term reproduction
14
GO Category Biological Process
GO Term post-embryonic development
15
GO Category Biological Process
GO Term embryo development
16
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants YES