LOC_Os07g49390

Expression Profile

RGAP LOCUS ID LOC_Os07g49390
RAP-DB ID Os07g0694600
Function P-protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 12

2) CELLO Prediction
localization Nuclear
score 1.181

3) NUCPRED Prediction
localization Non Nuclear
score 0.36

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.64
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Mtr1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 1
Number of Bipartite 1
Basic residues % 0.118
NLS score 0.89
Protein Sequence >LOC_Os07g49390.1 protein
MVSPSLRIPAAARVFDPAINTRCPPPHAVVMRMRSRSRRSIAASASPPGDPSIRDPISLPRPLTSADLMEASGDGLKVAYQGCPGAYSEAAAKKAYPSCH
TVPCEYFETAFQAVENWVADRAVLPLENSLGGSIHRNYDLLLRHRLHIVGEVRLAVRHCLLANRGVKIQNLRSAMSHPQALAQCEQTLTKLGIEHREAVD
DTAGAAKLIAEQKLQDTGAVASSLAAQLYGLDILAENIQDDTDNVTRFMMLAREPIIPRTDKPFKTSIVFSLEEGPGQLFKALAVFALRKINLTKMESRP
HKKKPLRIADDNCSAPLKHFDYLFYVDLEASMADPNAQNALANLKEFATFLRVLGSYPTDVSEA

GO Analysis
1
GO Category Molecular Function
GO Term catalytic activity
2
GO Category Biological Process
GO Term biosynthetic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No